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355 Open 720 Closed
355 Open 720 Closed
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Issues list

Error parsing VCF with ./. genotype bug Something isn't working VCF
#1232 opened Jan 20, 2025 by davmlaw SA Path VG 4
@davmlaw
ClinGen Allele - variant with ref=N causes KeyError: <GenomeBuild: GRCh38>
#1231 opened Jan 16, 2025 by davmlaw
3
Catch "NodeOutOfDateException: The node was updated while loading."
#1230 opened Jan 16, 2025 by davmlaw
Gene Symbol search should be case insensitive
#1229 opened Jan 16, 2025 by davmlaw
@davmlaw
VEP high memory usage for BRCA1 transcripts work around
#1228 opened Jan 16, 2025 by davmlaw
1
SV Annotation HGVS - wrong version, also was slow, lots of ClinGen errors bug Something isn't working
#1227 opened Jan 14, 2025 by davmlaw
Classification report errors due to ACMG ekey changes
#1226 opened Jan 14, 2025 by davmlaw
7
VEP - structural variants too long to annotate
#1224 opened Jan 13, 2025 by davmlaw
Upgrade DataTables to version 2
#1223 opened Jan 13, 2025 by TheMadBug
@TheMadBug
1
Clingen HGVS requests for variants that are too long
#1222 opened Jan 8, 2025 by davmlaw
@davmlaw
4
T2T - TypeError: grid[0] is undefined
#1221 opened Dec 20, 2024 by davmlaw
T2T allele liftover issues
#1220 opened Dec 20, 2024 by davmlaw
@davmlaw
T2T - Quick analysis testing
#1219 opened Dec 20, 2024 by davmlaw
@davmlaw
1
T2T - Annotation description page shows columns that don't exist in build bug Something isn't working
#1218 opened Dec 19, 2024 by davmlaw
T2T - Classification grid dies due to no cached column
#1217 opened Dec 19, 2024 by davmlaw
@davmlaw
T2T - gnomAD liftover contains duplicate entries
#1215 opened Dec 18, 2024 by davmlaw
1
as_symbolic_or_explicit_according_to_size - gives different results depending if starts as symbolic or not bug Something isn't working
#1214 opened Dec 17, 2024 by davmlaw
@davmlaw
2
Refactor ColumnVEPField to be simpler data structures
#1213 opened Dec 17, 2024 by davmlaw
Analysis optimisation
#1211 opened Dec 11, 2024 by davmlaw VG4 non-critical
Deployment check improvements
#1210 opened Dec 6, 2024 by davmlaw
@davmlaw
1
Consolidate / Fix broken loading spinners
#1206 opened Nov 27, 2024 by davmlaw
Minor ColumnVCFInfo fixes (Export VCF info)
#1202 opened Nov 21, 2024 by davmlaw
Data - filter to user
#1200 opened Nov 19, 2024 by davmlaw VG4 non-critical
@davmlaw
Make some fields mandatory - eg "tagging" etc
#1199 opened Nov 19, 2024 by davmlaw VG4 non-critical
2
subprocess.CalledProcessError: Command 'bcftools +liftover /mnt/variantgrid/data/import_processing/liftover_4484/source_variants.GRCh37.vcf -- --src-fasta-ref /data/annotation/fasta/Homo_sapiens.GRCh37.75.dna.primary_assembly.fa.gz --fasta-ref /data/annot
#1197 opened Nov 18, 2024 by davmlaw SA Path VG 4
1
ProTip! Updated in the last three days: updated:>2025-01-16.