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Update URLs to no longer refer to variantclassification
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TheMadBug committed Mar 11, 2024
1 parent bb32820 commit 2ac944f
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2 changes: 1 addition & 1 deletion docs/integration/api/authentication.md
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Expand Up @@ -31,7 +31,7 @@ def ping() {
)
auth = OAuth2(client_id = client_id, token = token)

r = requests.get('https://shariant.org.au:444/variantclassification/api/evidence_keys', auth=auth)
r = requests.get('https://shariant.org.au/classification/api/evidence_keys', auth=auth)
}
```

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2 changes: 1 addition & 1 deletion docs/integration/api/classification_post.md
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@@ -1,7 +1,7 @@
# API Variant Classification POST

All operations against a variant classification submission from your lab can be performed against a single end point:
https://shariant.org.au/variantclassification/api/classifications/v2/record/
https://shariant.org.au/classification/api/classifications/v2/record/

Ensure that any posts there are passing the required authentication data and is sending data as ContentType "application/json"

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2 changes: 1 addition & 1 deletion docs/integration/basics/getting_started.md
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Expand Up @@ -32,7 +32,7 @@ Some additional questions you may want to ask at this point:

## Step 3 : Mapping from your structure to Shariants

Given any individual field you can enter in your system, how does it map to our [pre-registered set of evidence keys](https://shariant.org.au/variantclassification/evidence_keys)?
Given any individual field you can enter in your system, how does it map to our [pre-registered set of evidence keys](https://shariant.org.au/classification/evidence_keys)?
The sync tool may just need to use a different field name, or the mapping process may be more complicated.

For example, if your system has a Yes/No field called "This gene is known to be associated with X-linked recessive disease." that would map to our field "mode_of_inheritance" with a value of "x_linked_recessive".
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2 changes: 1 addition & 1 deletion docs/integration/evidence_keys/overview.md
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Expand Up @@ -2,7 +2,7 @@

A variant classification in Shariant is mostly comprised of evidence key values.

[Evidence keys can be viewed here](https://shariant.org.au/variantclassification/evidence_keys)
[Evidence keys can be viewed here](https://shariant.org.au/classification/evidence_keys)

Extra details

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