Updating GitHub links

DESCRIPTION

@@ -12,8 +12,8 @@ Description: A package to facilitate the construction of reproducible pipelines
    construction of input objects for several multi-omics integration packages
   (such as mixOmics or MOFA), as well as visualisation of the results and comparison
   of different integration tools.
-URL: https://github.com/PlantandFoodResearch/moiraine, https://bookish-disco-p832pyq.pages.github.io/
-BugReports: https://github.com/PlantandFoodResearch/moiraine/issues
+URL: https://github.com/Plant-Food-Research-Open/moiraine, https://plant-food-research-open.github.io/moiraine/
+BugReports: https://github.com/Plant-Food-Research-Open/moiraine/issues
 License: MIT + file LICENSE
 Encoding: UTF-8
 Roxygen: list(markdown = TRUE)

README.Rmd

@@ -43,15 +43,15 @@ The workflow for a typical multi-omics integration analysis handled with `moirai
 
 * Comparison of the integration results obtained by different methods or pre-processing approaches.
 
-An overview of the capabilities of the package is available [here](https://solid-lamp-kq546rq.pages.github.io/overview.html).
+An overview of the capabilities of the package is available [here](https://plant-food-research-open.github.io/moiraine-manual/overview.html).
 
 ## Installation
 
 You can install the development version of moiraine from [GitHub](https://github.com/) with:
 
 ``` r
 # install.packages("devtools")
-devtools::install_github("PlantandFoodResearch/moiraine")
+devtools::install_github("Plant-Food-Research-Open/moiraine")
 ```
 
 ## Example
@@ -66,6 +66,6 @@ library(moiraine)
 create_moiraine_pipeline()
 ```
 
-The [user manual](https://solid-lamp-kq546rq.pages.github.io/) provides an in-depth walk-through of a multi-omics integration analysis with the package.
+The [user manual](https://plant-food-research-open.github.io/moiraine-manual/) provides an in-depth walk-through of a multi-omics integration analysis with the package.
 
 Before using `moiraine`, we encourage you to get familiar with the `targets` package; the [`targets` manual](https://books.ropensci.org/targets/) is a great place to start.

README.md

@@ -53,7 +53,7 @@ The workflow for a typical multi-omics integration analysis handled with
   pre-processing approaches.
 
 An overview of the capabilities of the package is available
-[here](https://solid-lamp-kq546rq.pages.github.io/overview.html).
+[here](https://plant-food-research-open.github.io/moiraine-manual/overview.html).
 
 ## Installation
 
@@ -62,7 +62,7 @@ You can install the development version of moiraine from
 
 ``` r
 # install.packages("devtools")
-devtools::install_github("PlantandFoodResearch/moiraine")
+devtools::install_github("Plant-Food-Research-Open/moiraine")
 ```
 
 ## Example
@@ -76,9 +76,10 @@ library(moiraine)
 create_moiraine_pipeline()
 ```
 
-The [user manual](https://solid-lamp-kq546rq.pages.github.io/) provides
-an in-depth walk-through of a multi-omics integration analysis with the
-package.
+The [user
+manual](https://plant-food-research-open.github.io/moiraine-manual/)
+provides an in-depth walk-through of a multi-omics integration analysis
+with the package.
 
 Before using `moiraine`, we encourage you to get familiar with the
 `targets` package; the [`targets`

_pkgdown.yml

@@ -1,4 +1,4 @@
-url: https://bookish-disco-p832pyq.pages.github.io/
+url: https://plant-food-research-open.github.io/moiraine/
 template:
   bootstrap: 5
   bootswatch: zephyr
@@ -12,16 +12,16 @@ navbar:
   type: default
   left:
   - text: Overview
-    href: https://solid-lamp-kq546rq.pages.github.io/overview.html
+    href: https://plant-food-research-open.github.io/moiraine-manual/overview.html
   - text: Reference
     href: reference/index.html
   - text: Manual
-    href: https://solid-lamp-kq546rq.pages.github.io/
+    href: https://plant-food-research-open.github.io/moiraine-manual/
   - text: News
     href: news/index.html
   right:
   - icon: fa-github fa-lg
-    href: https://github.com/PlantandFoodResearch/moiraine
+    href: https://github.com/Plant-Food-Research-Open/moiraine
 
 reference:
 - title: "Project management"