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ahmig committed Jun 13, 2024
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[![PGO badge](https://img.shields.io/badge/PathoGenOmics-Lab-yellow.svg)](https://pathogenomics.github.io/)
[![Conda badge](https://img.shields.io/conda/d/tcfinder/nextclade)](https://anaconda.org/bioconda/tcfinder)
[![Release](https://img.shields.io/github/release/PathoGenOmics-Lab/tcfinder.svg)](https://github.com/PathoGenOmics-Lab/tcfinder/releases)
![Build](https://github.com/PathoGenOmics-Lab/tcfinder/actions/workflows/build.yml/badge.svg)
![Test](https://github.com/PathoGenOmics-Lab/tcfinder/actions/workflows/test.yml/badge.svg)

A lightweight tool to find clusters of samples from a list of identifiers within a phylogeny in phylo4 format
(see [`phylobase`](https://cran.r-project.org/web/packages/phylobase/vignettes/phylobase.html)),
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