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Development #4

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wants to merge 27 commits into from
Closed

Development #4

wants to merge 27 commits into from

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tornikeo
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Changelog:

  1. Adds doctests
  2. Limit test on github to python versions that actually can do CPU-based tests
  3. Modify figure generating notebooks to address reviewer questions
  4. Move a few deps to dev, instead of being mandatory
  5. Remove CLI, since it is unlikely to be used, and move the gradio app to its own repo at HF

tornikeo added 24 commits July 26, 2024 13:00
@tornikeo
Update ReadME, fix matchms removing add_losses
3399b8a
@tornikeo
Update the colab tutorial
5c703b2
@tornikeo
Add flake8
0759225
@tornikeo
Add a visual guide figure for SimMS
4d5557b
@tornikeo
Fix ReadME type
d02fc5e
@tornikeo
Include BLINK comparison, fix ReadME
c1c607d 
BLINK: Simplify plotting

Include numpy version notice in colab tutorial

Update README
@tornikeo
Update BLINK benchmark
74779cd
@tornikeo
Update citation
d8d07a5
@tornikeo
Loosen numba requirements in favor of matchms
42c8db9
@tornikeo
Re-add HF spaces demo
c513561
@tornikeo
Fix incorrectly set up test for FP comparsion
6438cb5
@tornikeo
Fix typo in readme
57dee09
@tornikeo
Respect NUMBA SIM env var in CPU tests
4babe67
@tornikeo
Change speed with comparisons/s
53bbf03
@tornikeo
Remove non-vital dependencies
b364bb1
@tornikeo
Don't mention experimental CLI in the readme
b8f194d
@tornikeo
Add one doctest for cosine greedy
4d6e8d0
@tornikeo
Add doctests
ee46d71
@tornikeo
Fix tests picking up data dirs
2f431f8
@tornikeo
Rely on matchms for numba dependency
bd20e91
@tornikeo
Merge branch 'main' into development
c79f4b7
@tornikeo
Add CudaFingerPrint doctest
d5c440b
@tornikeo
Make figure visuals more consistent
9343e21
@tornikeo
Update pyporoject.toml to best practices
6a571a6
@tornikeo tornikeo closed this Jan 17, 2025
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@tornikeo