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Architecture update#6

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NikitaMishin merged 11 commits intomasterNikitaMishin/semilocal:masterfrom architectureUpdateNikitaMishin/semilocal:architectureUpdateCopy head branch name to clipboardApr 27, 2022

+4,045-27

Commits

Commits on Jan 31, 2022

• new architecture (more c++): added naive braid mul & naive sticky braid & added tests

  NikitaMishin

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  2e32def

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• bug fix with precalcMap & move to store in precalc also hash to reduce space requirements

  NikitaMishin

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  917ef95

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Commits on Feb 1, 2022

• all steady ant impl & part of semi-local lcs

  NikitaMishin

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  bc26312

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Commits on Feb 2, 2022

• added open mp version and staggered sticky multiplication

  NikitaMishin

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  71a7896

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Commits on Feb 11, 2022

• added rest semi local implementation & small bug fixment for staggered implementations

  NikitaMishin

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  7440509

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Commits on Feb 16, 2022

• several lcs implementations (todo: bit parallel ones)

  NikitaMishin

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  3f9d78f

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• simple hyyro algo wrapper & bug fix for him

  NikitaMishin

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  3fb7ecd

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Commits on Mar 27, 2022

• our bit parall algo in new architecture (todo edge cases + non binary alphabet)

  NikitaMishin

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  4265ee4

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Commits on Apr 3, 2022

• adjust encoding and strands labelling to avoid extra bitwise computation in case when len(string) % |w| != 0

  NikitaMishin

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  359f982

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Commits on Apr 5, 2022

• partial, working binary alphabet with padding but not working non binary with align (TODO, possible layout stuff)

  NikitaMishin

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  5d82cc6

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Commits on Apr 6, 2022

• fixed for alignemnt and multiple alphabet via changing layout

  NikitaMishin

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  0504675

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