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Automate building external libraries#694

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PhilMiller merged 32 commits intoNOAA-OWP:masterNOAA-OWP/ngen:masterfrom program--:jsm-automate-externprogram--/ngen:jsm-automate-externCopy head branch name to clipboardJan 25, 2024

+390-347

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Commits on Jan 25, 2024

• cmake: automate building extern libraries; see extended commit msg

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• Be more exact in disabling SLoTH testing

  

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• Try to let CMake build PET automatically

  

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• Declare dependence of PET test on PET external module

  

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• Bugfix: use correctly prefixed variable name

  

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• cmake: update status info; fix ngen_add_tests depends; set bmi_c ON for PET github actions

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• cmake: fix dependency typo in ngen_add_test

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• cmake: refactor iso_c_bmi/noah-owp-modular listfiles; add add_fortran_library function

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• cmake: refactor test_bmi_fortran listfile

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• cmake: replace add_fortran_library so projects can be built independently; add netcdf find for noah-owp-modular

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• gh: rm building submodules for fortran BMI tests

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• cmake: fix target link, bmi_fortran_iso_c -> iso_c_bmi

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• cmake: change scope of compile options to PRIVATE to prevent non-portability

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• gh: attempt to specify fortran compiler for test_bmi_fortran job

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• gh: add fortran compiler setup step for macOS runners when bmi_fortran is ON

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• cmake: add correct requirements/dependencies for test_bmi_multi

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• gh: fix placement of fortran env step; cmake: add missing ffree-line-length-none option

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• gh: remove submod build steps for integration tests

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• gh: refactor docker workflow

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• docker: revert pybind/gtest submodule updates; cmake: ensure sloth has default visbility instead of hidden

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• docker: include git files in build context

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• cmake: rm find bmi_fortran_iso_c module

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• cmake: update submodules on configure

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• cmake: update extern bmi-cxx

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• cmake: add recursive flag to git submodules function

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• cmake: finer options for building models; default visibility for imported targets

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• cmake: revert visibility modification to just sloth

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• cmake: add ngen_with_extern_all option

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• cmake: rm fully-deprecated option; ensure all support

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• gh: rm submodule build steps

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• docker: update boost URL

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• docker: bump boost version; gh: bump checkout to v4

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