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Py_Modify #292

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Py_Modify #292

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mforootan
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  • Make a new branch of gdc-docs, and modify any Python script that currently just prints to console so that it writes to a file.
  • Add remarks explaining what the script does to the beginning of all of them (pretty much copy-pasting what's already in the documentation page into the script box).
  • Make the sample file examples executable (so the user can simply copy-paste scripts, run, and see some output), as much as possible (using real examples); or clearly explain required changes.

ebusygina and others added 30 commits June 18, 2024 17:03
Changing mentions of v1 to reference 2.0
…ion, Seurat - 10x Chromium, STAR - Counts, STAR 2-Pass Chimeric, STAR 2-Pass Genome, STAR 2-Pass Transcriptome, STAR-Fusion workflows
DOC-424 updates repository docs with new biospecimen filters
Documenting the PATCH method
Adding descriptions of each example
DOC-425 part 5: GATK4 MuTect2 Tumor-Only Annotation, GATK4 MuTect2 Tumor-Only, MuSE Annotation, MuSE, MuTect2 Annotation, and MuTect2
wwysoc2 and others added 30 commits November 21, 2024 10:46
Added return to removed props
* PEAR-2195 - add noreferrer to links

* PEAR-2195 - remove change to theme
Adding WGS variant documentation - rough draft
Moving WGS information from the WXS documentation
Editing mkdocs
Portal vid - Add to tutorial page
Draft of DR42 Release Notes
Rearranged order and removed WGS variant project list
Changing dashes to asterisks
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