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Py_Modify #292
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mforootan
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mforootan
commented
Jan 27, 2021
- Make a new branch of gdc-docs, and modify any Python script that currently just prints to console so that it writes to a file.
- Add remarks explaining what the script does to the beginning of all of them (pretty much copy-pasting what's already in the documentation page into the script box).
- Make the sample file examples executable (so the user can simply copy-paste scripts, run, and see some output), as much as possible (using real examples); or clearly explain required changes.
Changing mentions of v1 to reference 2.0
Fix v1 references
…ion, Seurat - 10x Chromium, STAR - Counts, STAR 2-Pass Chimeric, STAR 2-Pass Genome, STAR 2-Pass Transcriptome, STAR-Fusion workflows
DOC-424 updates repository docs with new biospecimen filters
Final release notes for McClintock
Documenting the PATCH method
Adding PATCH method
Adding descriptions of each example
Doc 433 submission
New Cohort MAF video
DOC-425 part 5: GATK4 MuTect2 Tumor-Only Annotation, GATK4 MuTect2 Tumor-Only, MuSE Annotation, MuSE, MuTect2 Annotation, and MuTect2
Added line to release notes
Added 2.3.1 header
Added return to removed props
* PEAR-2195 - add noreferrer to links * PEAR-2195 - remove change to theme
Adding WGS variant documentation - rough draft
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Moving WGS information from the WXS documentation
Editing mkdocs
Portal vid - Add to tutorial page
Draft of DR42 Release Notes
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Rearranged order and removed WGS variant project list
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
Co-authored-by: Bill Wysocki <[email protected]>
DR42 Release Notes
Changing dashes to asterisks
WGS Variant Documentation
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