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  • University of Oxford
  • Oxford

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  1. Code_EpigeneticAnalysis Code_EpigeneticAnalysis Public

    This notebook describes the analysis and interpretation of EM-Seq data generated for developmental timepoints

    HTML

  2. Codes_CellFateSpecification Codes_CellFateSpecification Public

    This repository contains the scripts used for the analysis of blastomere-specific transcripts localisation during early embryogenesis. The notebooks also generates figures summarising main results.

    HTML

  3. Codes_GenomeAnnotation Codes_GenomeAnnotation Public

    This repository contains the scripts used for genome assembly gap filling and annotation

    Jupyter Notebook

  4. Codes_TranscriptomicAnalysis Codes_TranscriptomicAnalysis Public

    This repository contains the scripts used for the analysis of embryo RNA-seq data, including quantification and interpretation

    HTML

  5. NGSdata_analysis_scripts NGSdata_analysis_scripts Public

    Shell