delete the --cov in yaml github actions

LCOGT · Jan 13, 2025 · 94ceb85 · 94ceb85
1 parent c2b1582
commit 94ceb85
Show file tree

Hide file tree

Showing 4 changed files with 12 additions and 6 deletions.
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -32,4 +32,4 @@ jobs:
 
     - name: Test with PyTest
       run: |
-        python3 -m pytest --cov=inflammation.models tests/test_models.py
+        python3 -m pytest tests/test_models.py
diff --git a/microlensing_photometry/astrometry/wcs.py b/microlensing_photometry/astrometry/wcs.py
@@ -70,12 +70,14 @@ def refine_image_wcs(image, stars_image, image_wcs, gaia_catalog, star_limit = 1
     stars_positions = np.array(star_pix).T
 
     model_gaia_image = image_tools.build_image(stars_positions, fluxes, image.shape,
-                                          image_fraction=1)
+                                                image_fraction=1,star_limit =  star_limit)
 
-    model_image = image_tools.build_image(stars_image[:,:2], [1]*len(stars_image), image.shape, image_fraction=1)
+    model_image = image_tools.build_image(stars_image[:,:2], [1]*len(stars_image), image.shape, image_fraction=1,
+                                          star_limit = star_limit)
 
-    shiftx, shifty = find_images_shifts(model_gaia_image, model_image, image_fraction=0.25, upsample_factor=1)
 
+    shiftx, shifty = find_images_shifts(model_gaia_image, model_image, image_fraction=0.25, upsample_factor=1)
+    print(shiftx,shifty)
     dists = sspa.distance.cdist(stars_image[:star_limit,:2],
                                 np.c_[star_pix[0][:star_limit] - shiftx, star_pix[1][:star_limit] - shifty])
     mask = dists < 10

diff --git a/microlensing_photometry/logistics/image_tools.py b/microlensing_photometry/logistics/image_tools.py
@@ -28,7 +28,6 @@ def build_image(star_positions, fluxes, image_shape, image_fraction = 0.25, star
     XX, YY = np.indices((21, 21))
 
     model_gaussian = psf.Gaussian2d(1, XX.max()/2, XX.max()/2, 3, 3, XX, YY)
-
     model_image = np.zeros(image_shape)
 
     for ind in range(len(sub_star_positions)):

diff --git a/microlensing_photometry/photometry/aperture_photometry.py b/microlensing_photometry/photometry/aperture_photometry.py
@@ -58,12 +58,17 @@ def process_image(self):
         """
         Process the image following the various steps
         """
-
+        import time
+        start = time.time()
         self.log.info('Start Image Processing')
 
         self.find_star_catalog()
+        print(time.time()-start)
         self.refine_wcs()
+        print(time.time()-start)
+
         self.run_aperture_photometry()
+        print(time.time()-start)
 
     def find_star_catalog(self):
         """