Commenting out download_atom_data to test cache atomic data

KasukabeDefenceForce · May 29, 2024 · 472cd20 · 472cd20
1 parent 0cacc1f
commit 472cd20
Show file tree

Hide file tree

Showing 20 changed files with 21 additions and 21 deletions.
diff --git a/docs/contributing/tools/profiling/profiling_example.ipynb b/docs/contributing/tools/profiling/profiling_example.ipynb
@@ -58,7 +58,7 @@
     "\n",
     "from tardis import run_tardis\n",
     "from tardis.io.atom_data.util import download_atom_data\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/contributing/tools/profiling/tardis_profiling_threads.ipynb b/docs/contributing/tools/profiling/tardis_profiling_threads.ipynb
@@ -53,7 +53,7 @@
     "from tardis.simulation import Simulation\n",
     "from tardis import run_tardis\n",
     "from tardis.io.atom_data.util import download_atom_data\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "\n",
     "import time\n",
     "import numpy as np\n",

diff --git a/docs/io/grid/how_to_TardisGridTutorial.ipynb b/docs/io/grid/how_to_TardisGridTutorial.ipynb
@@ -30,7 +30,7 @@
    "outputs": [],
    "source": [
     "# We download the atomic data needed to run a TARDIS simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n"
    ]
   },
   {

diff --git a/docs/io/optional/how_to_custom_source.ipynb b/docs/io/optional/how_to_custom_source.ipynb
@@ -57,7 +57,7 @@
    "outputs": [],
    "source": [
     "# Download the atomic data used for a run of TARDIS\n",
-    "download_atom_data(\"kurucz_cd23_chianti_H_He\")"
+    "# download_atom_data(\"kurucz_cd23_chianti_H_He\")"
    ]
   },
   {

diff --git a/docs/io/optional/tutorial_callback_example.ipynb b/docs/io/optional/tutorial_callback_example.ipynb
@@ -53,7 +53,7 @@
     "from tardis.io.atom_data.util import download_atom_data\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "\n",
     "# We run the simulation with our callback\n",
     "sim = run_tardis('tardis_example.yml', \n",

diff --git a/docs/io/optional/tutorial_logging_configuration.ipynb b/docs/io/optional/tutorial_logging_configuration.ipynb
@@ -63,7 +63,7 @@
    "outputs": [],
    "source": [
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/io/output/how_to_physical_quantities.ipynb b/docs/io/output/how_to_physical_quantities.ipynb
@@ -35,7 +35,7 @@
    "source": [
     "# Download the atomic data\n",
     "from tardis.io.atom_data.util import download_atom_data\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "\n",
     "# Download the example configuration file\n",
     "!curl -O https://raw.githubusercontent.com/tardis-sn/tardis/master/docs/tardis_example.yml"

diff --git a/docs/io/output/how_to_plasma_graph.ipynb b/docs/io/output/how_to_plasma_graph.ipynb
@@ -40,7 +40,7 @@
    "outputs": [],
    "source": [
     "#downloading atom data\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/io/output/how_to_rpacket_tracking.ipynb b/docs/io/output/how_to_rpacket_tracking.ipynb
@@ -169,7 +169,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/io/output/how_to_to_hdf.ipynb b/docs/io/output/how_to_to_hdf.ipynb
@@ -30,7 +30,7 @@
     "from tardis.io.atom_data.util import download_atom_data\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "\n",
     "# We run the simulation\n",
     "simulation = run_tardis('tardis_example.yml')"

diff --git a/docs/io/visualization/how_to_generating_widgets.ipynb b/docs/io/visualization/how_to_generating_widgets.ipynb
@@ -33,7 +33,7 @@
     "from tardis.io.atom_data.util import download_atom_data\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data(\"kurucz_cd23_chianti_H_He\")\n",
+    "# download_atom_data(\"kurucz_cd23_chianti_H_He\")\n",
     "\n",
     "sim = run_tardis(\"tardis_example.yml\", virtual_packet_logging=True)"
    ]
@@ -254,7 +254,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.7.10"
+   "version": "3.11.5"
   },
   "notify_time": "5",
   "toc": {

diff --git a/docs/io/visualization/how_to_sdec_plot.ipynb b/docs/io/visualization/how_to_sdec_plot.ipynb
@@ -52,7 +52,7 @@
     "from tardis.io.atom_data.util import download_atom_data\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "\n",
     "sim = run_tardis(\"tardis_example.yml\", virtual_packet_logging=True)\n"
    ]

diff --git a/docs/io/visualization/tutorial_convergence_plot.ipynb b/docs/io/visualization/tutorial_convergence_plot.ipynb
@@ -43,7 +43,7 @@
     "from tardis.io.atom_data.util import download_atom_data\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "\n",
     "# We run a simulation\n",
     "sim = run_tardis('tardis_example.yml', show_convergence_plots=True, export_convergence_plots=True)"

diff --git a/docs/io/visualization/tutorial_montecarlo_packet_visualization.ipynb b/docs/io/visualization/tutorial_montecarlo_packet_visualization.ipynb
@@ -41,7 +41,7 @@
    "outputs": [],
    "source": [
     "# Download atom data\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/multiindex_isotope_decay_data.ipynb b/docs/multiindex_isotope_decay_data.ipynb
@@ -68,7 +68,7 @@
    ],
    "source": [
     "# Download the atom data file from tardis-refdata repo to run this cell.\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "atom_data_file = 'kurucz_cd23_chianti_H_He.h5'\n",
     "atom_data = AtomData.from_hdf(atom_data_file)"
    ]

diff --git a/docs/physics/setup/model.ipynb b/docs/physics/setup/model.ipynb
@@ -61,7 +61,7 @@
     "import copy\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')\n",
+    "# download_atom_data('kurucz_cd23_chianti_H_He')\n",
     "atom_data = AtomData.from_hdf('kurucz_cd23_chianti_H_He.h5')"
    ]
   },

diff --git a/docs/physics/setup/setup_example.ipynb b/docs/physics/setup/setup_example.ipynb
@@ -24,7 +24,7 @@
     "from tardis.io.atom_data.util import download_atom_data\n",
     "\n",
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/physics/spectrum/basic.ipynb b/docs/physics/spectrum/basic.ipynb
@@ -62,7 +62,7 @@
    "outputs": [],
    "source": [
     "# We download the atomic data needed to run the simulation\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/physics/update_and_conv/update_and_conv.ipynb b/docs/physics/update_and_conv/update_and_conv.ipynb
@@ -177,7 +177,7 @@
     "from astropy import units as u, constants as const\n",
     "\n",
     "# We download the atomic data needed to run this notebook\n",
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {

diff --git a/docs/quickstart.ipynb b/docs/quickstart.ipynb
@@ -35,7 +35,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "download_atom_data('kurucz_cd23_chianti_H_He')"
+    "# download_atom_data('kurucz_cd23_chianti_H_He')"
    ]
   },
   {