RKI-data #11912

	name: "RKI-data"
	on:
	workflow_dispatch:
	schedule:
	- cron: "0 8,14,21 * * *"


	jobs:
	build:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@main
	with:
	persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal token
	fetch-depth: 1 # otherwise, you will failed to push refs to dest repo

	- name: Setup Python
	uses: actions/setup-python@v4
	with:
	python-version: '3.x' # Version range or exact version of a Python version to use, using SemVer's version range syntax
	architecture: 'x64' # optional x64 or x86. Defaults to x64 if not specified

	- name: Install requirenments
	run: \|
	pip3 install -r .github/workflows/python_requirements.txt

	- name: Download RKI data
	run: \|
	cd ./code
	python3 ./get_rki_hospitalization_data.py

	- name: Deconvolute data
	run: \|
	cd ./code
	python3 ./deconvolute_rolling_sum.py

	- name: Create reporting triangle
	run: \|
	cd ./code
	python3 ./create_reporting_triangle.py
	python3 ./preprocess_reporting_triangle.py
	python3 ./timeseries_by_reporting.py

	- name: Commit files
	env:
	AUTH: ${{ secrets.GITHUBTOKEN }}
	run: \|
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Action - RKI Update"
	git remote rm origin
	git remote add origin https://${AUTH}@github.com/KITmetricslab/hospitalization-nowcast-hub.git > /dev/null 2>&1
	git pull origin main
	git add --all
	git commit --allow-empty -m "Daily RKI update"

	- name: Push changes
	run: \|
	git push --quiet --set-upstream origin HEAD:main
	echo "pushed to github"

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