v1.4
v1.4
- BUGFIX - Corrected TPM counts
- BUGFIX - Corrected overcounting of the individual alignment-feature overlap counts*
- FEATURE - Added --min_mapping_quality argument to only keep reads that surpass this min quality score
- More tweaks for speed (about 30% faster than v1.3)
- Renamed a bunch of "fragment" variables to "alignment" since many of these variables also represented reads