Update OWL file (#221)

Co-authored-by: GitHub <[email protected]>
HUPO-PSI · Nov 3, 2023 · c302754 · c302754
1 parent e9412f6
commit c302754
Showing 1 changed file with 74 additions and 2 deletions.
diff --git a/psi-ms.owl b/psi-ms.owl
@@ -34,13 +34,13 @@
      xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"
      xmlns:caloha-reqs-vetted="http://purl.obolibrary.org/obo/caloha-reqs-vetted#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/ms.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/ms/4.1.134/ms.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/ms/4.1.135/ms.owl"/>
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/pato.owl"/>
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/stato.owl"/>
         <oboInOwl:NamespaceIdRule rdf:datatype="http://www.w3.org/2001/XMLSchema#string">* MS:$sequence(7,0,9999999)$</oboInOwl:NamespaceIdRule>
         <oboInOwl:NamespaceIdRule rdf:datatype="http://www.w3.org/2001/XMLSchema#string">* PEFF:$sequence(7,0,9999999)$</oboInOwl:NamespaceIdRule>
         <oboInOwl:auto-generated-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBO-Edit 2.3.1</oboInOwl:auto-generated-by>
-        <oboInOwl:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string">06:10:2023 11:30</oboInOwl:date>
+        <oboInOwl:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string">02:11:2023 11:30</oboInOwl:date>
         <oboInOwl:default-namespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:default-namespace>
         <oboInOwl:hasOBOFormatVersion rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.2</oboInOwl:hasOBOFormatVersion>
         <oboInOwl:saved-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Eric Deutsch</oboInOwl:saved-by>
@@ -70664,6 +70664,78 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/MS_1003395 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1003395">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_1000483"/>
+        <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Q Exactive GC Orbitrap GC-MS/MS hybrid quadrupole Orbitrap mass spectrometer.</obo:IAO_0000115>
+        <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:hasOBONamespace>
+        <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1003395</oboInOwl:id>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Q Exactive GC Orbitrap</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1003395"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Q Exactive GC Orbitrap GC-MS/MS hybrid quadrupole Orbitrap mass spectrometer.</owl:annotatedTarget>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PSI:MS</oboInOwl:hasDbXref>
+    </owl:Axiom>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MS_1003396 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1003396">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_1000490"/>
+        <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Agilent 8890 Gas Chromatograph System.</obo:IAO_0000115>
+        <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:hasOBONamespace>
+        <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1003396</oboInOwl:id>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">8890 GC/MS</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1003396"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Agilent 8890 Gas Chromatograph System.</owl:annotatedTarget>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PSI:MS</oboInOwl:hasDbXref>
+    </owl:Axiom>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MS_1003397 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1003397">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_1003123"/>
+        <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Bruker Daltonics&apos; timsTOF fleX MALDI-2.</obo:IAO_0000115>
+        <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:hasOBONamespace>
+        <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1003397</oboInOwl:id>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">timsTOF fleX MALDI-2</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1003397"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Bruker Daltonics&apos; timsTOF fleX MALDI-2.</owl:annotatedTarget>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PSI:MS</oboInOwl:hasDbXref>
+    </owl:Axiom>
+
+
+
+    <!-- http://purl.obolibrary.org/obo/MS_1003398 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1003398">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_1000524"/>
+        <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The data contained in this file have been processed to remove, collapse, or label one or more dimensions of the original dataset, such as charge deconvolution or ion mobility deconvolution. To determine the type of deconvolution done, the reader should consult the appropriate section of the file, such as the data processing methods in an mzML file.</obo:IAO_0000115>
+        <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:hasOBONamespace>
+        <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1003398</oboInOwl:id>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">deconvoluted data</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1003398"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The data contained in this file have been processed to remove, collapse, or label one or more dimensions of the original dataset, such as charge deconvolution or ion mobility deconvolution. To determine the type of deconvolution done, the reader should consult the appropriate section of the file, such as the data processing methods in an mzML file.</owl:annotatedTarget>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PSI:MS</oboInOwl:hasDbXref>
+    </owl:Axiom>
+
+
+
     <!-- http://purl.obolibrary.org/obo/MS_4000000 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_4000000">