Add meeting notes December 13

meeting_notes/2023/20231213_telco.md

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+# QC working group teleconference 13 December 2023
+
+- Wout Bittremieux
+- Dave Tabb
+- Julian Uszkoreit
+- Mathias Walzer
+
+Excused:
+
+- Chris Bielow
+- Nils Hoffmann
+
+---
+
+## PSI Meeting 2024:
+
+- Registration for the [PSI Meeting 2024](https://www.psidev.info/hupo-psi-meeting-2024) will open soon.
+- Which working group members will attend in-person? Yes: Wout. Maybe: Julian, Mathias. No: Dave.
+- There will likely be several travel grants available to support in-person attendance.
+- We'll try to schedule afternoon sessions to allow for remote participation, given the time zone difference.
+
+## TDAuditor
+
+- Dave shared an update on TDAuditor. The main next step will be to request several CV terms to finalize development of TDAuditor.
+- mzQC integration is currently by reading a text file exported by TDAuditor in R and exporting to mzQC using rmzqc.
+
+## Specification document
+
+- Wout and Chris did a final pass through the specification document two weeks ago to make sure the reviewer comments were adequately addressed and to ensure that the document aligns with technical specifications.
+- The specification document has been resubmitted to the PSI document process. Official PSI acceptance should hopefully follow soon!
+
+# mzQC software libraries manuscript
+
+We discussed steps needed to finalize the mzQC software libraries manuscript:
+
+- Mathias described the latest QC metrics data analysis update, followed by a discussion on how best to visualize and discuss the results in the manuscript.
+- Mathias will share the latest version of the data analysis notebook for collaborative feedback on the data analysis presentation.
+- Wout will do an editing pass through the manuscript.
+- Goal: finish the manuscript in the next 1.5 week and put a preprint on bioRxiv before the holidays.
+
+## mzQC specification manuscript
+
+We briefly revisted the use cases for the mzQC specification manuscript:
+
+- Outlier detection: Wout & Dave will work on performing outlier detection on the previous MTb data Dave has used.
+- Longitudinal analysis of QC metrics: Mathias has access to longitudinal data from QCloud. A use case geared towards core facilities is very important to include.
+- Repository/large-scale analysis: Julian could get some data from MPC dating back from 2015 to now.
+- Lipidomics: Nils has a lipidomics dataset where QC metrics can be investigated in the context of the experimental design.
+
+## Miscellaneous
+
+- No meeting in two weeks because of the holiday period. The next meeting will be on January 10, 2024.