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Biological sex of the individual Schema

https://raw.githubusercontent.com/EbiEga/ega-metadata-schema/main/schemas/EGA.individual.json#/properties/minimalPublicAttributes/properties/biologicalSex

An organismal quality inhering in a bearer by virtue of the bearer's physical expression of sexual characteristics. In other words, the trait that determines the individual's (from which the sample derives) reproductive function: mainly male or female. Term chosen from a list of controlled vocabulary (CV). If you cannot find your term in the CV list, please create an issue at our metadata GitHub repository proposing its addition.

Abstract Extensible Status Identifiable Custom Properties Additional Properties Access Restrictions Defined In
Can be instantiated No Unknown status Unknown identifiability Forbidden Allowed none EGA.individual.json*

biologicalSex Type

string (Biological sex of the individual)

biologicalSex Constraints

enum: the value of this property must be equal to one of the following values:

Value Explanation
"male" [PATO:0000384]: A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.
"female" [PATO:0000383]: A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.
"hermaphrodite" [PATO:0001340]: An organism having both male and female sexual characteristics and organs. A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.
"pseudohermaphrodite" [PATO:0001827]: A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of one sex and external sexual characteristics of the other sex.
"unknown" [NCIT:C17998]: The biological sex is unknown, not assesed or not available.

biologicalSex Examples

"male"