Merge pull request #24 from jimmielin/hplin/fix_aer_deposition

Fix dry and wet deposition for GEOS-Chem non-gas species.
ESCOMP · Apr 18, 2023 · d77da0b · d77da0b
2 parents 217721d + 794d1ba
commit d77da0b
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Showing 5 changed files with 17 additions and 15 deletions.
diff --git a/bld/namelist_files/use_cases/2000_geoschem.xml b/bld/namelist_files/use_cases/2000_geoschem.xml
@@ -12,7 +12,7 @@
 
 <ncdata dyn="fv"  hgrid="1.9x2.5">/glade/p/univ/umit0034/Shared/GEOS-Chem/f.e20.FC2010.f19_f19.144.GC_vbsext.001.cam.i.0007-01-01-00000.nc</ncdata>
 
-<dep_data_file>/glade/u/home/elundgren/drydep_henrys_law_nc/dep_data_file_geoschem.nc</dep_data_file>
+<dep_data_file>/glade/p/univ/umit0034/Shared/dep_data_file_geoschem_c230417.nc</dep_data_file>
 
 <!-- Settings mostly in common with 2000_trop_strat_vbs_cam6.xml -->
 
@@ -43,12 +43,12 @@
 <!-- Temporarily include the wetdep/drydep lists until there is a better way -->
 
 <!-- gas dry deposition -->
-<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </drydep_list>
 
 <!-- gas wet deposition list -->
 <!-- species in wetdep but not drydep: MEK, MP, MPN, PRPE -->
-<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </gas_wetdep_list>
 
 <!-- aerosol dry deposition list -->

diff --git a/bld/namelist_files/use_cases/2010_geoschem.xml b/bld/namelist_files/use_cases/2010_geoschem.xml
@@ -10,7 +10,7 @@
 
 <ncdata dyn="fv"  hgrid="1.9x2.5">/glade/p/univ/umit0034/Shared/GEOS-Chem/f.e20.FC2010.f19_f19.144.GC_vbsext.001.cam.i.0007-01-01-00000.nc</ncdata>
 
-<dep_data_file>/glade/u/home/elundgren/drydep_henrys_law_nc/dep_data_file_geoschem.nc</dep_data_file>
+<dep_data_file>/glade/p/univ/umit0034/Shared/dep_data_file_geoschem_c230417.nc</dep_data_file>
 
 <!-- Settings mostly in common with 2010_trop_strat_vbs_cam6.xml -->
 
@@ -39,12 +39,12 @@
 <!-- Temporarily include the wetdep/drydep lists until there is a better way -->
 
 <!-- gas dry deposition -->
-<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </drydep_list>
 
 <!-- gas wet deposition list -->
 <!-- species in wetdep but not drydep: MEK, MP, MPN, PRPE -->
-<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </gas_wetdep_list>
 
 <!-- aerosol dry deposition list -->

diff --git a/bld/namelist_files/use_cases/hist_geoschem.xml b/bld/namelist_files/use_cases/hist_geoschem.xml
@@ -12,7 +12,7 @@
 
 <ncdata dyn="fv"  hgrid="1.9x2.5">/glade/p/univ/umit0034/Shared/GEOS-Chem/f.e20.FC2010.f19_f19.144.GC_vbsext.001.cam.i.0007-01-01-00000.nc</ncdata>
 
-<dep_data_file>/glade/u/home/elundgren/drydep_henrys_law_nc/dep_data_file_geoschem.nc</dep_data_file>
+<dep_data_file>/glade/p/univ/umit0034/Shared/dep_data_file_geoschem_c230417.nc</dep_data_file>
 
 <!-- Settings mostly in common with hist_trop_strat_vbs_cam6.xml -->
 
@@ -37,12 +37,12 @@
 <!-- Temporarily include the wetdep/drydep lists until there is a better way -->
 
 <!-- gas dry deposition -->
-<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </drydep_list>
 
 <!-- gas wet deposition list -->
 <!-- species in wetdep but not drydep: MEK, MP, MPN, PRPE -->
-<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </gas_wetdep_list>
 
 <!-- aerosol dry deposition list -->

diff --git a/bld/namelist_files/use_cases/hist_geoschem_nudged.xml b/bld/namelist_files/use_cases/hist_geoschem_nudged.xml
@@ -12,7 +12,7 @@
 
 <ncdata dyn="fv"  hgrid="1.9x2.5">/glade/p/univ/umit0034/Shared/GEOS-Chem/f.e20.FC2010.f19_f19.144.GC_vbsext.001.cam.i.0007-01-01-00000.nc</ncdata>
 
-<dep_data_file>/glade/u/home/elundgren/drydep_henrys_law_nc/dep_data_file_geoschem.nc</dep_data_file>
+<dep_data_file>/glade/p/univ/umit0034/Shared/dep_data_file_geoschem_c230417.nc</dep_data_file>
 
 <!-- Settings mostly in common with hist_trop_strat_vbs_cam6.xml and hist_trop_strat_nudged_cam6 -->
 
@@ -91,13 +91,15 @@
 
 <!-- Temporarily include the wetdep/drydep lists until there is a better way -->
 
+<!-- Note: "gas" dry and wet deposition actually include aerosol (non-MAM) species from GEOS-Chem. -->
+
 <!-- gas dry deposition -->
-<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<drydep_list>'ACET','ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BRNO3','BZCO3H','BZPAN','CH2O','CL2','CLNO2','CLNO3','CLO','CLOO','CSL','EOH','ETHLN','ETHN','ETHP','ETNO3','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPALD1','HPALD2','HPALD3','HPALD4','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDC','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','IPRNO3','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MENO3','MGLY','MOH','MONITS','MONITU','MPAN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','N2O5','NH3','NO2','NPHEN','NPRNO3','O3','PAN','PHEN','PP','PPN','PROPNN','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </drydep_list>
 
 <!-- gas wet deposition list -->
 <!-- species in wetdep but not drydep: MEK, MP, MPN, PRPE -->
-<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2'
+<gas_wetdep_list>'ACTA','ALD2','AROMP4','AROMP5','ATOOH','BALD','BENZP','BR2','BRCL','BZCO3H','BZPAN','CH2O','CSL','EOH','ETHLN','ETHN','ETHP','ETP','GLYC','GLYX','H2O2','HAC','HBR','HC5A','HCL','HCOOH','HI','HMHP','HMML','HNO3','HOBR','HOCL','HOI','HONIT','HPETHNL','I2','I2O2','I2O3','I2O4','IBR','ICHE','ICL','ICN','ICPDH','IDCHP','IDHDP','IDHPE','IDN','IEPOXA','IEPOXB','IEPOXD','IHN1','IHN2','IHN3','IHN4','INPB','INPD','IONO','IONO2','ITCN','ITHN','LIMO','LVOC','LVOCOA','MACR1OOH','MAP','MCRDH','MCRENOL','MCRHN','MCRHNB','MCRHP','MCT','MEK','MGLY','MOH','MONITS','MONITU','MP','MPAN','MPN','MTPA','MTPO','MVK','MVKDH','MVKHC','MVKHCB','MVKHP','MVKN','MVKPC','NH3','NPHEN','PAN','PHEN','PP','PPN','PROPNN','PRPE','PRPN','PYAC','R4N2','R4P','RA3P','RB3P','RIPA','RIPB','RIPC','RIPD','RP','SO2','AERI','AONITA','ASOA1','ASOA2','ASOA3','ASOAN','ASOG1','ASOG2','ASOG3','BRSALA','BRSALC','INDIOL','IONITA','ISALA','ISALC','MONITA','MSA','NH4','NIT','NITS','SALAAL','SALACL','SALCAL','SALCCL','SO4S','SOAGX','SOAIE','TSOA0','TSOA1','TSOA2','TSOA3','TSOG0','TSOG1','TSOG2','TSOG3','PFE'
 </gas_wetdep_list>
 
 <!-- aerosol dry deposition list -->