{2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892

bedroge · 2025-01-24T18:48:46Z

1 out of 88 required modules missing:

* jedi/0.19.0-GCCcore-12.3.0 (jedi-0.19.0-GCCcore-12.3.0.eb)

1 out of 8 required modules missing:

* Highway/1.0.4-GCCcore-12.3.0 (Highway-1.0.4-GCCcore-12.3.0.eb)

1 out of 35 required modules missing:

* ELPA/2023.05.001-foss-2023a (ELPA-2023.05.001-foss-2023a.eb)

1 out of 9 required modules missing:

* libxc/6.2.2-GCC-12.3.0 (libxc-6.2.2-GCC-12.3.0.eb)

2 out of 36 required modules missing:

* ParMETIS/4.0.3-gompi-2023a (ParMETIS-4.0.3-gompi-2023a.eb)
* SuperLU_DIST/8.1.2-foss-2023a (SuperLU_DIST-8.1.2-foss-2023a.eb)

5 out of 73 required modules missing:

* ParMETIS/4.0.3-gompi-2023a (ParMETIS-4.0.3-gompi-2023a.eb)
* Hypre/2.29.0-foss-2023a (Hypre-2.29.0-foss-2023a.eb)
* SuperLU_DIST/8.1.2-foss-2023a (SuperLU_DIST-8.1.2-foss-2023a.eb)
* SuiteSparse/7.1.0-foss-2023a (SuiteSparse-7.1.0-foss-2023a.eb)
* PETSc/3.20.3-foss-2023a (PETSc-3.20.3-foss-2023a.eb)

7 out of 80 required modules missing:

* ParMETIS/4.0.3-gompi-2023a (ParMETIS-4.0.3-gompi-2023a.eb)
* SuiteSparse/7.1.0-foss-2023a (SuiteSparse-7.1.0-foss-2023a.eb)
* Hypre/2.29.0-foss-2023a (Hypre-2.29.0-foss-2023a.eb)
* SuperLU_DIST/8.1.2-foss-2023a (SuperLU_DIST-8.1.2-foss-2023a.eb)
* netCDF-Fortran/4.6.1-gompi-2023a (netCDF-Fortran-4.6.1-gompi-2023a.eb)
* PETSc/3.20.3-foss-2023a (PETSc-3.20.3-foss-2023a.eb)
* MODFLOW/6.4.4-foss-2023a (MODFLOW-6.4.4-foss-2023a.eb)

eessi-bot · 2025-01-24T18:48:50Z

Instance eessi-bot-mc-aws is configured to build for:

architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/sapphire_rapids, x86_64/intel/skylake_avx512, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
repositories: eessi.io-2023.06-software, eessi.io-2023.06-compat

eessi-bot · 2025-01-24T18:48:51Z

Instance eessi-bot-mc-azure is configured to build for:

architectures: x86_64/amd/zen4
repositories: eessi.io-2023.06-software, eessi.io-2023.06-compat

bedroge · 2025-01-24T18:48:56Z

bot: build repo:eessi.io-2023.06-software arch:x86_64/intel/sapphire_rapids

eessi-bot · 2025-01-24T18:48:59Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/sapphire_rapids from bedroge
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids resulted in:
- submitted job 42410, for details & status see {2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892 (comment)

eessi-bot · 2025-01-24T18:48:59Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/sapphire_rapids from bedroge
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids resulted in:
- no jobs were submitted

eessi-bot · 2025-01-24T18:49:03Z

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-sapphire_rapids for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.01/pr_892/42410

date	job status	comment
Jan 24 18:49:02 UTC 2025	submitted	job id `42410` awaits release by job manager
Jan 24 18:49:34 UTC 2025	released	job awaits launch by Slurm scheduler
Jan 24 18:55:42 UTC 2025	running	job `42410` is running
Jan 24 19:00:52 UTC 2025	finished	🤷 UNKNOWN (click triangle for detailed information) Job results file `_bot_job42410.result` does not exist in job directory or reading it failed. No artefacts were found/reported.
Jan 24 19:00:52 UTC 2025	test result	🤷 UNKNOWN (click triangle for detailed information) Job test file `_bot_job42410.test` does not exist in job directory or reading it failed.

…-layer into sapphire_rapids_eb490_2023a_batch3

bedroge · 2025-01-24T19:02:47Z

Cancelled the build, because this had to wait for #874 to get merged due to the changed Lmod SitePackage file.

bot: build repo:eessi.io-2023.06-software arch:x86_64/intel/sapphire_rapids

eessi-bot · 2025-01-24T19:02:50Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/sapphire_rapids from bedroge
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids resulted in:
- submitted job 42413, for details & status see {2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892 (comment)

eessi-bot · 2025-01-24T19:02:50Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/sapphire_rapids from bedroge
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/sapphire_rapids resulted in:
- no jobs were submitted

eessi-bot · 2025-01-24T19:02:54Z

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-sapphire_rapids for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.01/pr_892/42413

date	job status	comment
Jan 24 19:02:53 UTC 2025	submitted	job id `42413` awaits release by job manager
Jan 24 19:03:57 UTC 2025	released	job awaits launch by Slurm scheduler
Jan 24 19:05:02 UTC 2025	running	job `42413` is running
Jan 24 23:51:59 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-42413.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-sapphire_rapids-1737762064.tar.gz` size: 354 MiB (372190131 bytes) entries: 8553 modules under 2023.06/software/linux/x86_64/intel/sapphire_rapids/modules/all `ELPA/2023.05.001-foss-2023a.lua` `Highway/1.0.4-GCCcore-12.3.0.lua` `Hypre/2.29.0-foss-2023a.lua` `libxc/6.2.2-GCC-12.3.0.lua` `MODFLOW/6.4.4-foss-2023a.lua` `netCDF-Fortran/4.6.1-gompi-2023a.lua` `ParMETIS/4.0.3-gompi-2023a.lua` `PETSc/3.20.3-foss-2023a.lua` `SuiteSparse/7.1.0-foss-2023a.lua` `SuperLU_DIST/8.1.2-foss-2023a.lua` software under 2023.06/software/linux/x86_64/intel/sapphire_rapids/software `ELPA/2023.05.001-foss-2023a` `Highway/1.0.4-GCCcore-12.3.0` `Hypre/2.29.0-foss-2023a` `libxc/6.2.2-GCC-12.3.0` `MODFLOW/6.4.4-foss-2023a` `netCDF-Fortran/4.6.1-gompi-2023a` `ParMETIS/4.0.3-gompi-2023a` `PETSc/3.20.3-foss-2023a` `SuiteSparse/7.1.0-foss-2023a` `SuperLU_DIST/8.1.2-foss-2023a` other under 2023.06/software/linux/x86_64/intel/sapphire_rapids no other files in tarball
Jan 24 23:51:59 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/9) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86-64-intel-srapids-node+default P: perf: 704.918 timesteps/s (r:0, l:None, u:None) [ OK ] (2/9) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86-64-intel-srapids-node+default P: latency: 1.84 us (r:0, l:None, u:None) [ OK ] (3/9) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86-64-intel-srapids-node+default P: latency: 1.9 us (r:0, l:None, u:None) [ OK ] (4/9) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86-64-intel-srapids-node+default P: latency: 3.97 us (r:0, l:None, u:None) [ OK ] (5/9) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86-64-intel-srapids-node+default P: latency: 4.02 us (r:0, l:None, u:None) [ OK ] (6/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86-64-intel-srapids-node+default P: latency: 0.35 us (r:0, l:None, u:None) [ OK ] (7/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86-64-intel-srapids-node+default P: latency: 0.38 us (r:0, l:None, u:None) [ OK ] (8/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86-64-intel-srapids-node+default P: bandwidth: 13556.86 MB/s (r:0, l:None, u:None) [ OK ] (9/9) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86-64-intel-srapids-node+default P: bandwidth: 14079.77 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-42413.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jan 25 08:23:31 UTC 2025	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-sapphire_rapids-1737762064.tar.gz` to S3 bucket succeeded

ocaisa · 2025-01-25T08:25:03Z

@bedroge I note jedi in your original list of missing modules but it doesn't appear in the final tarball...

boegel · 2025-01-25T08:36:06Z

@bedroge I note jedi in your original list of missing modules but it doesn't appear in the final tarball...

That can still be tackled in another PR, no need to block deploy/merge over that?

bedroge · 2025-01-25T10:29:47Z

@bedroge I note jedi in your original list of missing modules but it doesn't appear in the final tarball...

I think this may have been listed there because I was running this on my laptop with the develop branch of easyconfigs in the search path, and I guess something was changed upstream related to jedi. I'm now running the same thing again in a clean environment, and it doesn't get listed anymore. There is no jedi at all in the build log either, so everything should be fine.

boegel · 2025-01-25T10:52:51Z

Tarball deployed, so merging...

eessi-bot · 2025-01-25T10:52:58Z

PR merged! Moved ['/project/def-users/SHARED/jobs/2025.01/pr_892/42410', '/project/def-users/SHARED/jobs/2025.01/pr_892/42413'] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.01.25

eessi-bot · 2025-01-25T10:52:58Z

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.01.25

another batch of apps

34928cb

bedroge added 2023.06-software.eessi.io 2023.06 version of software.eessi.io sapphire_rapids labels Jan 24, 2025

Merge branch '2023.06-software.eessi.io' of github.com:EESSI/software…

353562b

…-layer into sapphire_rapids_eb490_2023a_batch3

bedroge mentioned this pull request Jan 24, 2025

{2023.06}[2023a,sapphire_rapids] R-bundle-CRAN 2023.12 #893

Merged

bedroge added the ready-to-deploy Mark a PR as ready to deploy label Jan 25, 2025

boegel added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy labels Jan 25, 2025

ocaisa approved these changes Jan 25, 2025

View reviewed changes

boegel merged commit ff5da1c into EESSI:2023.06-software.eessi.io Jan 25, 2025
49 checks passed

bedroge deleted the sapphire_rapids_eb490_2023a_batch3 branch January 25, 2025 14:06

Provide feedback

Saved searches

Use saved searches to filter your results more quickly

{2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892

{2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892

bedroge commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025

eessi-bot bot commented Jan 24, 2025

bedroge commented Jan 24, 2025

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

bedroge commented Jan 24, 2025

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

ocaisa commented Jan 25, 2025

boegel commented Jan 25, 2025

bedroge commented Jan 25, 2025

boegel commented Jan 25, 2025

eessi-bot bot commented Jan 25, 2025

eessi-bot bot commented Jan 25, 2025

{2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892

{2023.06}[2023a,sapphire_rapids] Another batch of apps from EB 4.9.0 2023a easystack #892

Conversation

bedroge commented Jan 24, 2025 • edited Loading

eessi-bot bot commented Jan 24, 2025

eessi-bot bot commented Jan 24, 2025

bedroge commented Jan 24, 2025

eessi-bot bot commented Jan 24, 2025 • edited Loading

eessi-bot bot commented Jan 24, 2025 • edited Loading

eessi-bot bot commented Jan 24, 2025 • edited Loading

bedroge commented Jan 24, 2025

eessi-bot bot commented Jan 24, 2025 • edited Loading

eessi-bot bot commented Jan 24, 2025 • edited Loading

eessi-bot bot commented Jan 24, 2025 • edited Loading

ocaisa commented Jan 25, 2025

boegel commented Jan 25, 2025

bedroge commented Jan 25, 2025

boegel commented Jan 25, 2025

eessi-bot bot commented Jan 25, 2025

eessi-bot bot commented Jan 25, 2025

bedroge commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading

eessi-bot bot commented Jan 24, 2025 •

edited

Loading