prepared for Sept release

src/ontology/doid-edit.owl

@@ -13,7 +13,7 @@ Prefix(oboInOwl:=<http://www.geneontology.org/formats/oboInOwl#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/doid.owl>
-<http://purl.obolibrary.org/obo/doid/releases/2020-08-21/doid.owl>
+<http://purl.obolibrary.org/obo/doid/releases/2020-09-15/doid.owl>
 Import(<http://purl.obolibrary.org/obo/doid/obo/ext.owl>)
 Annotation(obo:IAO_0000700 obo:DOID_4)
 Annotation(dc:description "The Disease Ontology has been developed as a standardized ontology for human disease with the purpose of providing the biomedical community with consistent, reusable and sustainable descriptions of human disease terms, phenotype characteristics and related medical vocabulary disease concepts."^^xsd:string)
@@ -3003,6 +3003,7 @@ Declaration(Class(obo:DOID_0080774))
 Declaration(Class(obo:DOID_0080775))
 Declaration(Class(obo:DOID_0080776))
 Declaration(Class(obo:DOID_0080777))
+Declaration(Class(obo:DOID_0080778))
 Declaration(Class(obo:DOID_0090001))
 Declaration(Class(obo:DOID_0090002))
 Declaration(Class(obo:DOID_0090003))
@@ -26232,6 +26233,7 @@ AnnotationAssertion(Annotation(dc:type obo:ECO_0007646) Annotation(oboInOwl:hasD
 AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_0060030 "disease_ontology"^^xsd:string)
 AnnotationAssertion(oboInOwl:id obo:DOID_0060030 "DOID:0060030"^^xsd:string)
 AnnotationAssertion(rdfs:label obo:DOID_0060030 "autoimmune disease of eyes, ear, nose and throat"^^xsd:string)
+EquivalentClasses(obo:DOID_0060030 ObjectIntersectionOf(obo:DOID_417 ObjectSomeValuesFrom(obo:RO_0001025 obo:UBERON_0001032)))
 SubClassOf(obo:DOID_0060030 obo:DOID_417)
 
 # Class: obo:DOID_0060031 (autoimmune disease of gastrointestinal tract)
@@ -50652,6 +50654,18 @@ AnnotationAssertion(oboInOwl:id obo:DOID_0080777 "DOID:0080777")
 AnnotationAssertion(rdfs:label obo:DOID_0080777 "lung sarcomatoid carcinoma"@en)
 SubClassOf(obo:DOID_0080777 obo:DOID_3905)
 
+# Class: obo:DOID_0080778 (transient infantile liver failure)
+
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "url:https://pubmed.ncbi.nlm.nih.gov/19732863/") Annotation(oboInOwl:hasDbXref "url:https://pubmed.ncbi.nlm.nih.gov/21931168/") Annotation(oboInOwl:hasDbXref "url:https://pubmed.ncbi.nlm.nih.gov/27689697/") Annotation(oboInOwl:hasDbXref "url:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045200/") obo:IAO_0000115 obo:DOID_0080778 "A liver disease that is characterized by elevated liver enzymes, jaundice, vomiting, coagulopathy, and hyperbilirubinemia, and the presence of increased serum lactate and that has_material_basis_in homozygous or compound heterozygous mutation in the TRMU gene, which is involved in mitochondrial protein translation, on chromosome 22q13.")
+AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0080778 "GARD:10593")
+AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0080778 "OMIM:613070")
+AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_0080778 "ORDO:217371")
+AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_0080778 "disease_ontology")
+AnnotationAssertion(oboInOwl:id obo:DOID_0080778 "DOID:0080778")
+AnnotationAssertion(rdfs:label obo:DOID_0080778 "transient infantile liver failure"@en)
+SubClassOf(obo:DOID_0080778 obo:DOID_409)
+SubClassOf(obo:DOID_0080778 ObjectSomeValuesFrom(obo:IDO_0000664 obo:GENO_0000148))
+
 # Class: obo:DOID_0090001 (Fraser syndrome)
 
 AnnotationAssertion(Annotation(dc:type obo:ECO_0007645) Annotation(oboInOwl:hasDbXref "url:https://www.ncbi.nlm.nih.gov/pubmed/12766769"^^xsd:string) Annotation(oboInOwl:hasDbXref "url:https://www.ncbi.nlm.nih.gov/pubmed/15838507"^^xsd:string) Annotation(oboInOwl:hasDbXref "url:https://www.ncbi.nlm.nih.gov/pubmed/16894541"^^xsd:string) Annotation(oboInOwl:hasDbXref "url:https://www.ncbi.nlm.nih.gov/pubmed/22510445"^^xsd:string) obo:IAO_0000115 obo:DOID_0090001 "A syndrome characterized by cryptophthalmos, syndactyly, ambiguous genitalia, laryngeal and genitourinary malformations, oral clefting, and mental retardation that has_material_basis_in homozygous or compound heterozygous mutation in the FRAS1 gene on chromosome 4q21, the FREM2 gene on chromosome 13q13, or the GRIP1 gene on chromosome 12q14."^^xsd:string)