updated osteosarcoma child term classifications, added definitions

DiseaseOntology · Jan 29, 2024 · 8952967 · 8952967
1 parent 316d66e
commit 8952967
Showing 1 changed file with 6 additions and 4 deletions.
diff --git a/src/ontology/doid-edit.owl b/src/ontology/doid-edit.owl
@@ -151271,7 +151271,7 @@ SubClassOf(obo:DOID_3345 obo:DOID_9455)
 
 # Class: obo:DOID_3347 (osteosarcoma)
 
-AnnotationAssertion(Annotation(dc:type obo:ECO_0007637) Annotation(dc:type obo:ECO_0007638) Annotation(dc:type obo:ECO_0007641) Annotation(oboInOwl:hasDbXref "url:http://en.wikipedia.org/wiki/Osteosarcoma") Annotation(oboInOwl:hasDbXref "url:http://www.cancer.gov/dictionary?cdrid=45395") obo:IAO_0000115 obo:DOID_3347 "A bone sarcoma that is located_in bone that has_material_basis_in cells of mesenchymal origin.")
+AnnotationAssertion(Annotation(dc:type obo:ECO_0007637) Annotation(dc:type obo:ECO_0007638) Annotation(dc:type obo:ECO_0007641) Annotation(oboInOwl:hasDbXref "url:http://en.wikipedia.org/wiki/Osteosarcoma") Annotation(oboInOwl:hasDbXref "url:http://www.cancer.gov/dictionary?cdrid=45395") obo:IAO_0000115 obo:DOID_3347 "A bone sarcoma that is located_in bone that has_material_basis_in cells of mesenchymal origin. It usually involves bones and less frequently extraosseous sites. It often involves the long bones (particularly distal femur, proximal tibia, and proximal humerus).")
 AnnotationAssertion(oboInOwl:hasAlternativeId obo:DOID_3347 "DOID:183")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_3347 "GARD:7284")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_3347 "ICDO:9180/3")
@@ -151384,6 +151384,7 @@ SubClassOf(obo:DOID_3355 obo:DOID_201)
 
 # Class: obo:DOID_3356 (localized osteosarcoma)
 
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "url:https://www.cancer.org/cancer/types/osteosarcoma/detection-diagnosis-staging/staging.html") obo:IAO_0000115 obo:DOID_3356 "An osteosarcoma that is confined to a specific site without evidence of spread to other anatomic sites.")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_3356 "NCI:C7780")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_3356 "UMLS_CUI:C0278511")
 AnnotationAssertion(oboInOwl:hasExactSynonym obo:DOID_3356 "localised Osteogenic sarcoma"@en)
@@ -151393,7 +151394,7 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_3356 "disease_ontology")
 AnnotationAssertion(oboInOwl:id obo:DOID_3356 "DOID:3356")
 AnnotationAssertion(oboInOwl:inSubset obo:DOID_3356 doid:NCIthesaurus)
 AnnotationAssertion(rdfs:label obo:DOID_3356 "localized osteosarcoma")
-SubClassOf(obo:DOID_3356 obo:DOID_184)
+SubClassOf(obo:DOID_3356 obo:DOID_3347)
 SubClassOf(obo:DOID_3356 ObjectUnionOf(ObjectSomeValuesFrom(obo:RO_0001000 obo:CL_0000057) ObjectSomeValuesFrom(obo:RO_0001000 obo:CL_0000058) ObjectSomeValuesFrom(obo:RO_0001000 obo:CL_0000062)))
 SubClassOf(obo:DOID_3356 ObjectSomeValuesFrom(obo:RO_0004026 obo:UBERON_0001474))
 
@@ -151408,7 +151409,7 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_3357 "disease_ontology")
 AnnotationAssertion(oboInOwl:id obo:DOID_3357 "DOID:3357")
 AnnotationAssertion(oboInOwl:inSubset obo:DOID_3357 doid:NCIthesaurus)
 AnnotationAssertion(rdfs:label obo:DOID_3357 "extraosseous osteosarcoma")
-SubClassOf(obo:DOID_3357 obo:DOID_201)
+SubClassOf(obo:DOID_3357 obo:DOID_3347)
 SubClassOf(obo:DOID_3357 ObjectUnionOf(ObjectSomeValuesFrom(obo:RO_0001000 obo:CL_0000057) ObjectSomeValuesFrom(obo:RO_0001000 obo:CL_0000058) ObjectSomeValuesFrom(obo:RO_0001000 obo:CL_0000062)))
 
 # Class: obo:DOID_3359 (obsolete malignant extraskeletal cartilaginous and osseous tumor)
@@ -151657,6 +151658,7 @@ SubClassOf(obo:DOID_3374 obo:DOID_3376)
 
 # Class: obo:DOID_3376 (bone osteosarcoma)
 
+AnnotationAssertion(Annotation(oboInOwl:hasDbXref "url:https://my.clevelandclinic.org/health/diseases/15041-osteosarcoma") obo:IAO_0000115 obo:DOID_3376 "An osteosarcoma that is an usually aggressive malignant bone-forming mesenchymal neoplasm arising from the bone. It may arise de novo or from a pre-existing lesion of the bone. Pain and a palpable mass are the most frequent clinical sign and symptom. It may spread to other anatomic sites, particularly the lungs.")
 AnnotationAssertion(oboInOwl:hasAlternativeId obo:DOID_3376 "DOID:8580")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_3376 "NCI:C53707")
 AnnotationAssertion(oboInOwl:hasDbXref obo:DOID_3376 "SNOMEDCT_US_2023_03_01:307576001")
@@ -189341,7 +189343,7 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_7827 "disease_ontology")
 AnnotationAssertion(oboInOwl:id obo:DOID_7827 "DOID:7827")
 AnnotationAssertion(oboInOwl:inSubset obo:DOID_7827 doid:NCIthesaurus)
 AnnotationAssertion(rdfs:label obo:DOID_7827 "adult extraosseous osteosarcoma")
-SubClassOf(obo:DOID_7827 obo:DOID_3347)
+SubClassOf(obo:DOID_7827 obo:DOID_3357)
 SubClassOf(obo:DOID_7827 ObjectSomeValuesFrom(obo:RO_0002488 obo:HP_0003581))
 
 # Class: obo:DOID_783 (end stage renal disease)