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weekly release
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@elviram
elviram committed Mar 18, 2016
1 parent 51321c8 commit 3d741ce
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Showing 121 changed files with 1,324,978 additions and 155,911 deletions.
329 changes: 172 additions & 157 deletions src/ontology/catalog-v001.xml
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272 changes: 67 additions & 205 deletions src/ontology/diffs/doid-lastbuild.obo
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368 changes: 188 additions & 180 deletions src/ontology/doid-edit.owl
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42 changes: 21 additions & 21 deletions src/ontology/doid-metadata.txt
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NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=true 35497
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=true 33128
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=false 9256
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=false 6887
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 119641
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 47474
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=true 35498
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=true 33129
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=false 9257
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=false 6888
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 118900
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 47473
NUMBER_OF_AXIOMS.AXIOM_TYPE=DisjointClasses 0
NUMBER_OF_AXIOMS.AXIOM_TYPE=EquivalentClasses 1256
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 92291
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 8073
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 91550
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 8072
NUMBER_OF_AXIOMS.AXIOM_TYPE=DisjointClasses 0
NUMBER_OF_AXIOMS.AXIOM_TYPE=EquivalentClasses 3
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasRelatedSynonym 'has_related_synonym' 0: 367 (0.053288806) 1+: 6520 (0.9467112) >1: 46 (0.006679251)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=comment comment 0: 1004 (0.1457819) 1+: 5883 (0.85421807) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=created_by created_by 0: 762 (0.11064324) 1+: 6125 (0.88935673) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=creation_date creation_date 0: 762 (0.11064324) 1+: 6125 (0.88935673) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasNarrowSynonym 'has_narrow_synonym' 0: 4 (5.808044E-4) 1+: 6883 (0.9994192) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasAlternativeId 'has_alternative_id' 0: 669 (0.09713954) 1+: 6218 (0.90286046) >1: 250 (0.036300275)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=inSubset 'in_subset' 0: 1068 (0.15507478) 1+: 5819 (0.8449252) >1: 449 (0.06519529)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=IAO:0000115 'definition' 0: 2691 (0.39073616) 1+: 4196 (0.60926384) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasDbXref 'database_cross_reference' 0: 6286 (0.91273415) 1+: 601 (0.087265864) >1: 5982 (0.868593)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=id id 0: 6854 (0.9952084) 1+: 33 (0.0047916365) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasOBONamespace 'has_obo_namespace' 0: 6816 (0.9896907) 1+: 71 (0.010309278) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasExactSynonym 'has_exact_synonym' 0: 4722 (0.6856396) 1+: 2165 (0.31436038) >1: 2796 (0.4059823)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=label label 0: 6877 (0.998548) 1+: 10 (0.001452011) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasRelatedSynonym 'has_related_synonym' 0: 366 (0.053135887) 1+: 6522 (0.9468641) >1: 45 (0.006533101)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=comment comment 0: 1004 (0.14576074) 1+: 5884 (0.8542393) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=created_by created_by 0: 762 (0.110627174) 1+: 6126 (0.8893728) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=creation_date creation_date 0: 762 (0.110627174) 1+: 6126 (0.8893728) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasNarrowSynonym 'has_narrow_synonym' 0: 4 (5.807201E-4) 1+: 6884 (0.9994193) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasAlternativeId 'has_alternative_id' 0: 669 (0.09712543) 1+: 6219 (0.9028746) >1: 250 (0.036295004)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=inSubset 'in_subset' 0: 1070 (0.15534262) 1+: 5818 (0.84465736) >1: 449 (0.06518583)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=IAO:0000115 'definition' 0: 2692 (0.39082462) 1+: 4196 (0.6091754) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasDbXref 'database_cross_reference' 0: 6287 (0.9127468) 1+: 601 (0.08725319) >1: 5983 (0.86861205)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=id id 0: 6854 (0.9950639) 1+: 34 (0.004936121) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasOBONamespace 'has_obo_namespace' 0: 6816 (0.989547) 1+: 72 (0.010452962) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasExactSynonym 'has_exact_synonym' 0: 4550 (0.66056913) 1+: 2338 (0.3394309) >1: 2616 (0.37979093)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=label label 0: 6878 (0.9985482) 1+: 10 (0.0014518002) >1: 0 (0.0)
AXIOM_TYPE Declaration SubClassOf EquivalentClasses
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=results_in_formation_of 'results_in_formation_of' 1 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=transmitted_by 'transmitted_by' 1 0 0
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42 changes: 21 additions & 21 deletions src/ontology/doid-non-classified-metadata.txt
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Original file line number Diff line number Diff line change
@@ -1,28 +1,28 @@
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=true 35497
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=true 33128
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=false 9256
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=false 6887
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 119641
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 46492
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=true 35498
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=true 33129
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=false 9257
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=false 6888
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 118900
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 46490
NUMBER_OF_AXIOMS.AXIOM_TYPE=DisjointClasses 0
NUMBER_OF_AXIOMS.AXIOM_TYPE=EquivalentClasses 1256
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 92291
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 7091
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 91550
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 7089
NUMBER_OF_AXIOMS.AXIOM_TYPE=DisjointClasses 0
NUMBER_OF_AXIOMS.AXIOM_TYPE=EquivalentClasses 3
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasRelatedSynonym 'has_related_synonym' 0: 367 (0.053288806) 1+: 6520 (0.9467112) >1: 46 (0.006679251)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=comment comment 0: 1004 (0.1457819) 1+: 5883 (0.85421807) >1: 0 (0.0)
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NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=creation_date creation_date 0: 762 (0.11064324) 1+: 6125 (0.88935673) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasNarrowSynonym 'has_narrow_synonym' 0: 4 (5.808044E-4) 1+: 6883 (0.9994192) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasAlternativeId 'has_alternative_id' 0: 669 (0.09713954) 1+: 6218 (0.90286046) >1: 250 (0.036300275)
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NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=IAO:0000115 'definition' 0: 2691 (0.39073616) 1+: 4196 (0.60926384) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasDbXref 'database_cross_reference' 0: 6286 (0.91273415) 1+: 601 (0.087265864) >1: 5982 (0.868593)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=id id 0: 6854 (0.9952084) 1+: 33 (0.0047916365) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasOBONamespace 'has_obo_namespace' 0: 6816 (0.9896907) 1+: 71 (0.010309278) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasExactSynonym 'has_exact_synonym' 0: 4722 (0.6856396) 1+: 2165 (0.31436038) >1: 2796 (0.4059823)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=label label 0: 6877 (0.998548) 1+: 10 (0.001452011) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasRelatedSynonym 'has_related_synonym' 0: 366 (0.053135887) 1+: 6522 (0.9468641) >1: 45 (0.006533101)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=comment comment 0: 1004 (0.14576074) 1+: 5884 (0.8542393) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=created_by created_by 0: 762 (0.110627174) 1+: 6126 (0.8893728) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=creation_date creation_date 0: 762 (0.110627174) 1+: 6126 (0.8893728) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasNarrowSynonym 'has_narrow_synonym' 0: 4 (5.807201E-4) 1+: 6884 (0.9994193) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasAlternativeId 'has_alternative_id' 0: 669 (0.09712543) 1+: 6219 (0.9028746) >1: 250 (0.036295004)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=inSubset 'in_subset' 0: 1070 (0.15534262) 1+: 5818 (0.84465736) >1: 449 (0.06518583)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=IAO:0000115 'definition' 0: 2692 (0.39082462) 1+: 4196 (0.6091754) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasDbXref 'database_cross_reference' 0: 6287 (0.9127468) 1+: 601 (0.08725319) >1: 5983 (0.86861205)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=id id 0: 6854 (0.9950639) 1+: 34 (0.004936121) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasOBONamespace 'has_obo_namespace' 0: 6816 (0.989547) 1+: 72 (0.010452962) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasExactSynonym 'has_exact_synonym' 0: 4550 (0.66056913) 1+: 2338 (0.3394309) >1: 2616 (0.37979093)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=label label 0: 6878 (0.9985482) 1+: 10 (0.0014518002) >1: 0 (0.0)
AXIOM_TYPE Declaration SubClassOf EquivalentClasses
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=results_in_formation_of 'results_in_formation_of' 1 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=transmitted_by 'transmitted_by' 1 0 0
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