add constrains to apical and basal 3dinfo

ComplexOrganizationOfLivingMatter · Nov 11, 2021 · 21604a3 · 21604a3
1 parent 5d6396e
commit 21604a3
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/lib/featuresExtraction/obtain3DFeatures.m b/lib/featuresExtraction/obtain3DFeatures.m
@@ -26,6 +26,11 @@
             lateral3dInfo = lateral3dInfo_total;
             clearvars lateral3dInfo_total lateralLayerAux
         end
+
+        %delete non real neighbours assuming lateral contact threshold
+        apical3dInfo = cellfun(@(x,y) x(ismember(x,y)), apical3dInfo,lateral3dInfo,'UniformOutput',false);
+        basal3dInfo = cellfun(@(x,y) x(ismember(x,y)), basal3dInfo,lateral3dInfo,'UniformOutput',false);
+
 
         %check for non considered valid cells, and delete cells "0" volume
         missingCells = find(totalLateralCellsArea==0);