Sorted intervals into d4 functions

[northwestwitch]

Description

Added/Changed/Fixed

• Fix Handle the fact that d4tools sorts intervals by chrom, start and stop when calculating coverage #351

How to test

• Deploy on stage and check with a scout case, both report/overview and gene page

Expected outcome

• All pages should work

Review

• Tests executed by CR
• "Merge and deploy" approved by

This version is a

• MAJOR - when you make incompatible API changes
• MINOR - when you add functionality in a backwards compatible manner
• PATCH - when you make backwards compatible bug fixes or documentation/instructions

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 85.71429% with 4 lines in your changes missing coverage. Please review.

Project coverage is 91.26%. Comparing base (719f1b8) to head (7338d07).
Report is 49 commits behind head on main.

Files with missing lines	Patch %	Lines
src/chanjo2/meta/handle_d4.py	55.55%	4 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #358      +/-   ##
==========================================
+ Coverage   90.18%   91.26%   +1.07%     
==========================================
  Files          30       31       +1     
  Lines        1457     1476      +19     
==========================================
+ Hits         1314     1347      +33     
+ Misses        143      129      -14     

Flag	Coverage Δ
unittests	91.26% <85.71%> (+1.07%)	⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarCloud

[northwestwitch]

Report 🆗

Overview 🆗

Gene 🆗