Merge pull request #388 from Clinical-Genomics/fix_docker_compose_mysql

Fix the healthcheck step of the docker-compose MySQL file
Clinical-Genomics · Dec 11, 2024 · 83851f3 · 83851f3
2 parents 37d54f8 + 57a467d
commit 83851f3
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,3 +1,7 @@
+## [unreleased]
+### Fixed
+- The MariaDB healthcheck step in docker-compose-mysql.yml, preventing the demo app to start
+
 ## [2.1]
 ### Added
 - Refseq transcripts names on coverage overview page

diff --git a/docker-compose-mysql.yml b/docker-compose-mysql.yml
@@ -12,10 +12,12 @@ services:
       - MYSQL_DATABASE=${MYSQL_DATABASE_NAME}
       - MYSQL_HOST_PORT=${MYSQL_HOST_PORT}
       - MARIADB_RANDOM_ROOT_PASSWORD=T
-    healthcheck: # Wait for the service to be ready before accepting incoming connections
-      test: "mariadb --user=${MYSQL_USER} --password=${MYSQL_PASSWORD} --execute \"SHOW DATABASES;\""
-      timeout: 10s
-      retries: 20
+    healthcheck:
+      test: [ "CMD", "healthcheck.sh", "--connect", "--innodb_initialized" ]
+      start_period: 10s
+      interval: 10s
+      timeout: 5s
+      retries: 3
     volumes:
       - ${HOST_DATA_VOLUME}:${CONTAINER_DATA_VOLUME}
     networks: