fix: typos in FQscreen2 output filenames

fixes #59
CCBR · Dec 15, 2023 · 1623f6a · 1623f6a
1 parent 85052e5
commit 1623f6a
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/workflow/Snakefile b/workflow/Snakefile
@@ -173,8 +173,8 @@ elif not paired_end:
             # FastQ Screen
             expand(join(workpath,"FQscreen","{name}.R1.trim_screen.txt"),name=samples),
             expand(join(workpath,"FQscreen","{name}.R1.trim_screen.png"),name=samples),
-            expand(join(workpath,"FQscreen2","{name}.R1.trim_screen.txt"),name=samples),
-            expand(join(workpath,"FQscreen2","{name}.R1.trim_screen.png"),name=samples),
+            expand(join(workpath,"FQscreen2","{name}.R1_2.trim_screen.txt"),name=samples),
+            expand(join(workpath,"FQscreen2","{name}.R1_2.trim_screen.png"),name=samples),
 
             # Kraken + Krona
             expand(join(workpath,kraken_dir,"{name}.trim.kraken_bacteria.taxa.txt"),name=samples),