Created new conda environment and added it to github actions #21
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python | |
name: Cross-Platform Conda Environment Setup and Test | |
on: | |
push: | |
branches: #[ "main", "dev" ] | |
- main | |
pull_request: | |
branches: #[ "main" ] | |
- main | |
jobs: | |
build: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest, windows-latest] | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v3 | |
- name: Set up Miniconda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
python-version: 3.7 | |
auto-update-conda: false | |
- name: Initialize Conda (ubuntu only) # Windows doesnt require conda initialization | |
shell: bash -l {0} | |
if: runner.os == 'Linux' | |
run: | | |
conda init bash | |
source ~/.bashrc | |
conda create -y -n bnp python=3.7 | |
- name: Create and activate Conda environment and install dependencies | |
shell: bash -l {0} | |
run: | | |
conda create -y -n bnp python=3.7 | |
conda activate bnp | |
conda install -c conda-forge -c nvidia -c sleap -c anaconda sleap | |
pip uninstall -y opencv-python-headless | |
pip install "opencv-contrib-python<4.7.0" | |
pip install sleap_anipose | |
pip install "anipose<1.1" | |
pip install --upgrade apptools |