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Does it work with Metabarcoding nanopore data? #2

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DuttaAnik opened this issue Aug 28, 2024 · 2 comments
Open

Does it work with Metabarcoding nanopore data? #2

DuttaAnik opened this issue Aug 28, 2024 · 2 comments

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@DuttaAnik
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Hi,
Does Melon accept FastQ files from long-read metabarcoded data?
@xinehc
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xinehc commented Aug 28, 2024

Hi,

both fasta and fastq can be used as input, but make sure your fastq files are demultiplexed and quality-controlled.

@DuttaAnik
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Hi, thanks for the prompt reply. I will test out the tool then.

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@xinehc @DuttaAnik