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Feature request: support contigs/chromosomes without a 'chr' prefix #8

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ddpinto opened this issue Sep 15, 2024 · 0 comments
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@ddpinto
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ddpinto commented Sep 15, 2024

Currently SPLICE-q expects contigs to have a 'chr' prefix. However, this is not always the case for e.g. viral genomes or novel genome assemblies. It would be helpful if SPLICE-q can use contig (chromosome) names as-is, without trying to add a 'chr' prefix if one is missing.

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