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This branch is 33 commits ahead of, 2702 commits behind OHDSI/Vocabulary-v5.0:master.

MedDRA

Update of MedDRA

Prerequisites:

  • Schema DevV5 with copies of tables concept, concept_relationship and concept_synonym from ProdV5, fully indexed.
  • SNOMED must be loaded first
  • Working directory MedDRA.
  1. Run create_source_tables.sql

  2. Download the current Meddra from https://www.meddra.org/user?destination=downloads (english)

  3. Extract files from the folder "MedAscii": hlgt_hlt.asc hlt.asc hlt_pt.asc hlgt.asc llt.asc mdhier.asc pt.asc soc.asc soc_hlgt.asc

  4. Run in devv5 (with fresh vocabulary date and version): SELECT sources.load_input_tables('MedDRA',TO_DATE('20160901','YYYYMMDD'),'MedDRA version 19.1');

  5. Run load_stage.sql

  6. Run generic_update: devv5.GenericUpdate();