4.0.0

• [Added] a completely new functional analysis view for Metaproteomics
• [Added] a completely new functional analysis view for Tryptic peptide analysis
• [Added] handeling of alternate ids of GO terms
• [Improved] the waiting expirience of a Metaproteomics Analysis
• [Improved] strain names in peptidome analyis to be more clear
• [Improved] the confidentionality of your metaproteomics datasets
• [Improved] the test coverage of our frontend code
• [Improved] the pipeline to work for larger Uniprot releases
• [Updated] various dependencies
• [Updated] to UniProt 2018.06
• [Fixed] an issue that caused some proteome names to be cut off at a certain length

3.3.5

• fix an issue with IE11 by adding a fetch polyfill

3.3.4

• add levels parameter to the correct visualisation

3.3.3

• improve query performance of proteome loading
• improve the proteome preload scripts
• remove the export checkbox from the MPA search page
• faster and more correct missed cleavage handling
• enable form help tooltips on the MPA result page
• tweak the MPA progress bar
• fix the treemap colors

3.3.2

• fix an issue with the api "try it" feature

3.3.1

• Fix an issue with incompatible js code

3.3

• Completely rewrite the metaproteome analysis
• Restructure all javascript code
• Update to rails 5.1
• Fix an issue with the copy to clipboard button
• Fix an crash when searching for an empty query

3.2

• Update the publications section and about page
• Retire the position attribute for peptide
• Improve the performance of downloading proteome data
• Add a configure script for the makefile
• Add ec number and go term information to the database
• Make the make file and scripts more error resilient
• Fix an issue where not all type strains were added to the proteomes
• Fix an issue where the unique peptide finder could crash when requesting 0 sequences
• Update to rails 5.0 and Ruby 2.4
• Update UniProt to 2017.05

3.1.4

Update UniProt to 2016.10

3.1.3

• Update to UniProt 2016.05
• Add protein download to Unique Peptide Finder