Vague instructions

[asb2111991]

The instructions in "Open modules/configfile.py and change the following paths to match your folder structure:" are a little vague.

What folder structure? The zip files do not contain files like: 'BRATS2018_Unprocessed.h5'

It will be really helpful if you can add some screenshots and show how you set it up on your computer so that users can have some reference.

[asb2111991]

In the following instructions

_Download BRATS2018 dataset from the official website https://www.med.upenn.edu/sbia/brats2018/data.html and extract both the Training and Validation zip files to a folder, say:

/local-scratch/data/BRATS2018/Training/
/local-scratch/data/BRATS2018/Training/HGG
/local-scratch/data/BRATS2018/Training/LGG_

Another folder needs to be added:
/local-scratch/data/BRATS2018/HDF5_Datasets

And, in the scripts within the 'modules' folder, all the import commands containing
from modules. import

must be edited to remove 'modules.' making the command
from import