DESCRIPTION

Package: corHMM
Version: 2.10
Date: 2024-08-21
Title: Hidden Markov Models of Character Evolution
Authors@R: c(person("Jeremy", "Beaulieu", role=c("aut", "cre"),
                     email = "jmbeauli@uark.edu"),
                     person("Brian", "O'Meara", role=c("aut")),
		      person("Jeffrey", "Oliver", role=c("aut")),
			person("James", "Boyko", role=c("aut")))
Maintainer: Jeremy Beaulieu <jmbeauli@uark.edu>
Depends: ape, nloptr, GenSA
Suggests: testthat, knitr, rmarkdown
Imports: expm, numDeriv, corpcor, MASS, nnet, phangorn, parallel, viridis, Rmpfr, igraph, phytools, lhs
Description: Fits hidden Markov models of discrete character evolution which allow different transition rate classes on different portions of a phylogeny. Beaulieu et al (2013) <doi:10.1093/sysbio/syt034>.
License: GPL (>= 2)
VignetteBuilder: knitr