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Version 0.0.13:
- even more weird and wonderful packaging problems
Version 0.0.12:
- fix version deploy
Version 0.0.11:
- Version bump to 0.0.10
- restore cache
Version 0.0.10:
- restore cache
Version 0.0.10:
Version 0.0.9:
- pipenv lock to try fixing pypi deploy issues
Version 0.0.8:
- add doctest for mondo
- implement MONDO lookups
- move fieldnames to constants
- change messaging and only use longest fragment if long query
- adding lru cache, though our calls are rarely repeated :(
- use sessions to take advantage of any connection pooling we can get
- nicely aligned logging
- add ability to exclude some API calls
Version 0.0.7:
- add details on verbose to readme
- added a verbose output to find_term
- ols doctest more robust to changes in underlying ontology
- document suggest
- add a suggest mode to find_term
- add ORDO exact lookup
- get_ancestors raises a keyerror for an empty response
- phewascat tests were not being picked up
- _is_included guesses ontology when not directly specified
- get_ancestors handles empty responses
- clean whitespace in mappings file
- restrict to efo and hp in zooma
- logging name_to_node parsing
- improve find_term docs
Version 0.0.6:
- output label of match when used in batch mode
- handle iri to label lookups
- use dict to return quality, source, action
- works
- markdown readme
Version 0.0.5:
- fix pylint
Version 0.0.4:
- updated docs
- polishing CLI
- batch command line interface
- fix tests
- save pylint artifact (big otherwise)
- checking whether node is in the included branch of efo (and LOTS of linting)
- get ancestors
- find_efo becomes find_term given that we don't use efo alone
- return quality in the tuple
- explain the ot ontology difference
- exact match logic
- fix bumpv error msg
Version 0.0.3: