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NEWS.md

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0.99.3

  • Minimal functioning package created.
  • Mostly compliant with BiocCheck::BiocCheck() and goodpractice::goodpractice().

0.99.4

  • Fixed typos in vignettes.
  • Added explanation of ggplot connection to vignettes.
  • Added explanation for interactivity in iSEE to vignette.
  • Fixed global variables.
  • Fixed documentation in plot_hexbin_gene.
  • Reformatted news.
  • Added packages to suggests in description.

0.99.5

  • Fixed error introduced through merge conflict.

0.99.6

  • Changed the link from Seurat to Seurat-class.

0.99.7

  • Changed sapply to vapply in utility-function.

0.99.8

  • Fixed typos in vignettes.

1.0.0

  • Bioconductor release

1.1.1

  • Deprecated plot_hexbin_gene.
  • Updated plot_hexbin_feature to use all features, including genes.
  • Introduced plot_hexbin_fc for fold change visualization.
  • Introduced plot_hexbin_meta_plus and plot_hexbin_feature_plus to plot cluster outlines.
  • Introduced plot_hexbin_meta_shiny, plot_hexbin_feature_shiny and plot_hexbin_density_shiny for interactive visualization.
  • Changed internal structure.
  • Updated vignettes.
  • Included two new vignettes.
  • New README.

1.1.2

  • Changes to vignettes to comply with changes in Seurat

1.1.3

  • Updated the vignettes and example code to incorporate changes.
  • Added bivariate plotting feature.

1.1.4

  • Option to remove NAs for plot_hexbin_meta*.

1.1.5

  • Fix issues for feature names and col names with non-standard characters