Err in scar_score

[qquuzhao]

Error in if (!is.na(mat[x, ]$Bf) & !is.na(mat[x, ]$sd.Bf/sqrt(mat[x, ]$weight.Bf))) { :
Calls: scar_score ... lapply -> FUN -> baf.bayes -> mapply ->
Warning messages:
1: In b[which(diff(b) == 0) + 1] <- b[diff(b) == 0] + offset :
2: In b[which(diff(b) == 0) + 1] <- b[diff(b) == 0] + offset :
3: In max(segs.all$sd.BAF, na.rm = TRUE) :
how to change the problem~

[wolverinelei]

I have the same error, have you solved it?

[abhijitswain09]

Preprocessing started...
Error in sequenza.extract(seg, chromosome.list = paste("chr", c(1:24), :
unused arguments (gamma = 60, kmin = 50)