-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathNAMESPACE
74 lines (73 loc) · 2.08 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
# Generated by roxygen2: do not edit by hand
export(buildPathwaySpace)
export(expDecay)
export(linearDecay)
export(pathDistances)
export(plotPathDistances)
export(pspace.cols)
export(summitWatershed)
export(weibullDecay)
exportClasses(PathwaySpace)
exportMethods("vertexSignal<-")
exportMethods("vertexWeight<-")
exportMethods(circularProjection)
exportMethods(getPathwaySpace)
exportMethods(length)
exportMethods(names)
exportMethods(plotPathwaySpace)
exportMethods(polarProjection)
exportMethods(silhouetteMapping)
exportMethods(summitMapping)
exportMethods(vertexSignal)
exportMethods(vertexWeight)
import(methods)
importFrom(RANN,nn2)
importFrom(RGraphSpace,plotGraphSpace)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,coord_fixed)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,expansion)
importFrom(ggplot2,geom_area)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_raster)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,margin)
importFrom(ggplot2,scale_fill_gradientn)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_gray)
importFrom(ggplot2,theme_minimal)
importFrom(ggplot2,ylab)
importFrom(ggrepel,geom_text_repel)
importFrom(grDevices,adjustcolor)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,convertColor)
importFrom(grDevices,rgb)
importFrom(igraph,'E<-')
importFrom(igraph,'V<-')
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,as_adjacency_matrix)
importFrom(igraph,as_edgelist)
importFrom(igraph,degree)
importFrom(igraph,distances)
importFrom(igraph,ecount)
importFrom(igraph,is_directed)
importFrom(igraph,simplify)
importFrom(igraph,vcount)
importFrom(igraph,which_mutual)
importFrom(scales,rescale)
importFrom(stats,density)
importFrom(stats,median)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)