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run.simulation.bh
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##!/usr/bash
#mkdir ../output_zn/4ligand/simulation
mkdir ../output_zn/4ligand/simulation/$1_1
mkdir ../output_zn/4ligand/simulation/$1_2
mkdir ../output_zn/4ligand/simulation/$1_3
mkdir ../output_zn/4ligand/simulation/$1_4
mkdir ../output_zn/4ligand/simulation/$1_5
mkdir ../output_zn/4ligand/simulation/$1_6
mkdir ../output_zn/4ligand/simulation/$1_7
mkdir ../output_zn/4ligand/simulation/$1_8
mkdir ../output_zn/4ligand/simulation/$1_9
mkdir ../output_zn/4ligand/simulation/$1_10
mkdir ../output_zn/4ligand/simulation/$1_11
mkdir ../output_zn/4ligand/simulation/$1_12
mkdir ../output_zn/4ligand/simulation/$1_13
mkdir ../output_zn/4ligand/simulation/$1_14
mkdir ../output_zn/4ligand/simulation/$1_15
mkdir ../output_zn/4ligand/simulation/$1_16
mkdir ../output_zn/4ligand/simulation/$1_17
mkdir ../output_zn/4ligand/simulation/$1_18
mkdir ../output_zn/4ligand/simulation/$1_19
mkdir ../output_zn/4ligand/simulation/$1_20
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 1 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 1 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 1
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 2 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 2 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 2
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 3 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 3 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 3
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 4 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 4 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 4
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 5 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 5 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 5
echo
echo "###########################"
echo "Rep 1-5 done."
echo "###########################"
echo
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 6 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 6 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 6
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 7 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 7 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 7
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 8 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 8 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 8
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 9 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 9 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 9
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 10 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 10 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 10
echo
echo "###########################"
echo "Rep 6-10 done."
echo "###########################"
echo
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 11 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 11 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 11
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 12 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 12 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 12
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 13 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 13 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 13
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 14 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 14 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 14
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 15 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 15 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 15
echo
echo "###########################"
echo "Rep 11-15 done."
echo "###########################"
echo
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 16 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 16 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 16
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 17 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 17 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 17
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 18 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 18 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 18
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 19 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 19 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 19
nice -10 ./kmeans.mnr.optimalk.5.R ../output_zn/4ligand 4 6 $1 20 && nice -10 ./functional_characterization.1.R ../output_zn/4ligand $1 20 && nice -10 ./measures.vs.k.2.R ../output_zn/4ligand 6 $1 20
echo
echo "###########################"
echo "Rep 16-20 done."
echo "###########################"
echo