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Recommendations for performing GSEA on topics? #58

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AmosFong1 opened this issue Jan 11, 2025 · 0 comments
Open

Recommendations for performing GSEA on topics? #58

AmosFong1 opened this issue Jan 11, 2025 · 0 comments

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@AmosFong1
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I was wondering if one of the maintainers could provide some recommendations on how to perform GSEA on fastTopics derived topics. Would it be sensible to rank genes by -log10(lfsr) * LFC (assuming lfsr is analogous to q-value)?
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