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With Snakemake you can now specify the conda directive in your Snakefile even before imports to specify global workflow dependencies and environment. https://snakemake.readthedocs.io/en/stable/snakefiles/deployment.html#global-workflow-dependencies
conda
When I define this directive snakefmt thinks it's an error:
InvalidPython: Black error: Cannot parse: 7:6: conda:
The text was updated successfully, but these errors were encountered:
This is a duplicate of #209
Global use of conda: was added in v8.0, so will have to wait until we support v8.
conda:
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With Snakemake you can now specify the
conda
directive in your Snakefile even before imports to specify global workflow dependencies and environment. https://snakemake.readthedocs.io/en/stable/snakefiles/deployment.html#global-workflow-dependenciesWhen I define this directive snakefmt thinks it's an error:
The text was updated successfully, but these errors were encountered: