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Genome modeling and design across all domains of life

Jupyter Notebook 2,233 192 Updated Feb 24, 2025

AlphaFold 3 inference pipeline.

Python 6,123 753 Updated Feb 24, 2025

GCP for Bioinformatics Researchers

Jupyter Notebook 253 70 Updated Nov 25, 2024

Linux, Jenkins, AWS, SRE, Prometheus, Docker, Python, Ansible, Git, Kubernetes, Terraform, OpenStack, SQL, NoSQL, Azure, GCP, DNS, Elastic, Network, Virtualization. DevOps Interview Questions

Python 69,494 15,442 Updated Jan 25, 2025

A collection of inspiring lists, manuals, cheatsheets, blogs, hacks, one-liners, cli/web tools and more.

159,279 10,051 Updated Nov 19, 2024

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Python 996 354 Updated Aug 24, 2024
Python 2 1 Updated May 20, 2018

Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)

R 19 18 Updated May 6, 2019

R toolkit for single cell genomics

R 2,384 930 Updated Feb 26, 2025
Python 19 4 Updated Jul 4, 2017
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