slurm-array.tex

% Created 2015-03-30 Mon 15:10
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\title{`\#SBATCH --job-name=RUN$_{\mathrm{CREATE}}$\_{}CRIS\_{}RTP}
\author{Steven Buczkowski}
\date{30 March 2015}

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MATLAB=/usr/cluster/matlab/2014b/bin/matlab
MATOPT=' -nojvm -nodisplay -nosplash'

RTP$_{\mathrm{PROD2\}}$=\~{}/git/rtp$_{\mathrm{prod2\}}$

srun \$MATLAB \$MATOPTS -r ``addpath(genpath('\$RTP$_{\mathrm{PROD2\}}$')); run$_{\mathrm{cris}}$\_{}batch; exit''
    


function run$_{\mathrm{cris}}$\_{}batch()

addpath(genpath('/home/sbuczko1/git/rtp$_{\mathrm{prod2\}}$'));

slurmindex = str2num(getenv('SLURM$_{\mathrm{ARRAY}}$\_{}TASK\_{}ID'));
[status, infile] = system(sprintf('sed -n ``\%dp'' \~{}/cris-files-process.txt | \ldots{}
                                   tr -d ``\n''', slurmindex));

outpath='/asl/data/rtp$_{\mathrm{cris}}$\_{}slb';
[path, name, ext] = fileparts(infile);
outfile = fullfile(outpath, [strrep(name, `SDR', `rtp') `.rtp']);

create$_{\mathrm{cris}}$\_{}ccast\_{}hires\_{}rtp(infile, outfile)

end


\end{document}