#BEGIN_SRC sh :exports code #!/bin/bash
`#SBATCH –job-name=RUN_CREATE_CRIS_RTP
#SBATCH –partition=batch
#SBATCH –qos=short #SBATCH –account=pi_strow #SBATCH -N1 #SBATCH –mem-per-cpu=18000 #SBATCH –cpus-per-task 1 #SBATCH –time=00:40:00
#SBATCH –array=1-540:50
MATLAB=/usr/cluster/matlab/2014b/bin/matlab MATOPT=’ -nojvm -nodisplay -nosplash’
RTP_PROD2=~/git/rtp_prod2
srun $MATLAB $MATOPT -r “addpath(genpath(‘$RTP_PROD2’)); run_cris_batch; exit”
#END_SRC
#BEGIN_SRC matlab :exports code function run_cris_batch()
addpath(genpath(‘/home/sbuczko1/git/rtp_prod2’));
slurmindex = str2num(getenv(‘SLURM_ARRAY_TASK_ID’)); [status, infile] = system(sprintf(‘sed -n “%dp” ~/cris-files-process.txt | … tr -d “\n”’, slurmindex));
outpath=’/asl/data/rtp_cris_slb’; [path, name, ext] = fileparts(infile); outfile = fullfile(outpath, [strrep(name, ‘SDR’, ‘rtp’) ‘.rtp’]);
create_cris_ccast_hires_rtp(infile, outfile)
end
#END_SRC