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a.bib
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@ARTICLE{abbott:1999,
AUTHOR = {A. Abbott},
TITLE = {Alliance of {US} Labs Plans to Build Map of Cell
Signalling Pathways},
JOURNAL = NAT,
YEAR = 1999,
VOLUME = 402,
PAGES = {219--200}
}
@BOOK{abramowitz:1997,
EDITOR = {Milton Abramowitz and Irene A. Stegun},
TITLE = {Mathematical Functions: With Formulas, Graphs, and Mathematical Tables},
PUBLISHER = {Dover Publications Inc.},
MONTH = {December},
YEAR = {1977}
}
@ARTICLE{achard:2001,
AUTHOR = {Fr\'{e}d\'{e}rik Achard and Guy Vaysseix and Emmanuel Barillot},
TITLE = {{XML}, bioinformatics and data integration},
JOURNAL = BI,
YEAR = 2001,
VOLUME = 17,
NUMBER = 2,
PAGES = {115--125},
LOCATION = F
}
@INCOLLECTION{allen:2000,
AUTHOR = {Gabrielle Allen and Werner Benger and Tom Goodale and Hans-Christian
Hege and Gerd Lanfermann and Andr\'{e} Merzky and Thomas Radke and
Edward Seidel and John Shalf},
TITLE = {The {Cactus Code}: A Problem Solving Environment for the {G}rid},
BOOKTITLE = {Proceedings of the Ninth IEEE International Symposium on High Performance Distributed Computing (HPDC9)},
PUBLISHER = {IEEE Computer Society},
YEAR = 2000
}
@ARTICLE{allen:2003,
AUTHOR = {N. A. Allen and L. Calzone and K. C. Chen and A. Ciliberto and N. Ramakrishnanand and
C. A. Shaffer and J. C. Sible and
J. J. Tyson and M. T. Vass and L. T. Watson and J. W. Zwolak},
TITLE = {{M}odeling regulatory networks at {V}irginia {T}ech},
JOURNAL = {OMICS},
YEAR = 2003,
VOLUME = 7,
NUMBER = 3,
PAGES = {285--299}
}
@MISC{alvestrand:2001,
AUTHOR = {Harald Tveit Alvestrand},
TITLE = {{RFC 3066} - Tags for the Identification of Languages},
HOWPUBLISHED = {Available via the World Wide Web at \url{http://www.isi.edu/in-notes/rfc3066.txt}.},
PUBLISHER = {IETF},
YEAR = 2001,
MONTH = January
}
@article{andrews:2004,
title={Stochastic simulation of chemical reactions with spatial resolution and single molecule detail},
author={Andrews, Steven S and Bray, Dennis},
journal={Physical biology},
volume={1},
number={3},
pages={137},
year={2004},
publisher={IOP Publishing}
}
@MISC{apache:2001,
AUTHOR = {{Apache Software Foundation}},
TITLE = {Crimson Version 1.1},
HOWPUBLISHED = {Available via the World Wide Web at
\url{http://xml.apache.org/crimson/index.html}},
YEAR = 2001
}
@MISC{apache:2001b,
AUTHOR = {{Apache Software Foundation}},
TITLE = {Xerces Version 1.3.1},
HOWPUBLISHED = {Available via the World Wide Web at
\url{http://xml.apache.org/xerces-j/index.html}},
YEAR = 2001
}
@misc{apweiler_2004,
AUTHOR = {Apweiler, Rolf and Bairoch, Amos and Wu, Cathy},
TITLE = {UniProt: The Universal Protein Resource Home Page},
YEAR = 2004,
HOWPUBLISHED = {Available via the World Wide Web at \url{http://www.uniprot.org}}
}
@ARTICLE{apweiler_2004a,
AUTHOR = {Apweiler, R. and Bairoch, A. and Wu, C. H. and Barker, W. C. and Boeckmann, B. and Ferro, S. and Gasteiger, E. and Huang, H. and Lopez, R. and Magrane, M. and Martin, M. J. and Natale, D. A. and O'Donovan, C. and Redaschi, N. and Yeh, L. S.},
YEAR = 2004,
TITLE = {UniProt: the Universal Protein Knowledgebase},
JOURNAL = {Nucleic Acids Res.},
VOLUME = 32,
PAGES = {D115--D119}
}
@ARTICLE{arkin:1998,
AUTHOR = {A. Arkin and J. Ross and H. McAdams},
TITLE = {Stochastic kinetic analysis of developmental pathway
bifurcation in phage $\lambda$-infected {E}scherichia coli cells},
JOURNAL = {Genetics},
YEAR = 1998,
VOLUME = 149,
PAGES = {1633--1648}
}
@MISC{arkin:2001,
AUTHOR = {A.~P. Arkin},
TITLE = {\emph{Simulac} and \emph{Deduce}},
HOWPUBLISHED = {Available via the World Wide Web at
\url{http://gobi.lbl.gov/~aparkin/Stuff/Software.html}},
YEAR = 2001
}
@BOOK{arnold:1997,
AUTHOR = {K. Arnold and J. Gosling},
TITLE = {The {Java} Programming Language},
PUBLISHER = AW,
YEAR = 1997
}
@BOOK{arnold:2000,
EDITOR = {Ken Arnold},
TITLE = {The {Jini} Specification, 2nd Edition},
PUBLISHER = AW,
YEAR = 2000
}
@MISC{ascher:2001,
AUTHOR = {David Ascher and Paul~F. Dubois and Konrad Hinsen and
Jim Hugunin and Travis Oliphant},
TITLE = {Numerical {P}ython},
HOWPUBLISHED = {Available via the World Wide Web at
\url{http://www.numpy.org}.},
YEAR = 2001
}
@MISC{ausbrooks:2001,
AUTHOR = {Ron Ausbrooks and Stephen Buswell and St\'ephane Dalmas and Stan Devitt and Angel Diaz and
Roger Hunter and Bruce Smith and Neil Soiffer and Robert Sutor and Stephen Watt},
TITLE = {{M}athematical {M}arkup {L}anguage ({M}ath{ML}) {V}ersion 2.0},
HOWPUBLISHED = {Available via the World Wide Web at
\url{http://www.w3.org/TR/MathML2/}.},
YEAR = 2001
}
@MISC{ausbrooks:2003,
AUTHOR = {Ron Ausbrooks and Stephen Buswell and David Carlisle and St\'ephane Dalmas
and Stan Devitt and Angel Diaz and Max Froumentin and Roger Hunter
and Patrick Ion and Michael Kohlhase and Robert Miner and Nico Poppelier
and Bruce Smith and Neil Soiffer and Robert Sutor and Stephen Watt},
EDITOR = {David Carlisle and Patrick Ion and Robert Miner and Nico Poppelier},
TITLE = {{M}athematical {M}arkup {L}anguage ({M}ath{ML}) {V}ersion 2.0 (Second Edition):
{W3C} {Recommendation} 21 {October} 2003},
HOWPUBLISHED = {Available via the World Wide Web at
\url{http://www.w3.org/TR/2003/REC-MathML2-20031021/.}},
YEAR = 2003
}