Professor: Rob Patro
Course webpage: Computational Biology
- Counting DNA Nucleotides: http://rosalind.info/problems/dna/
- Overlap Graphs: http://rosalind.info/problems/grph/
- Inferring mRNA from Protein: http://rosalind.info/problems/mrna/
- Introduction to Random Strings: http://rosalind.info/problems/prob/
- Translating RNA into Protein: http://rosalind.info/problems/prot/
- RNA Splicing: http://rosalind.info/problems/splc/
- Genome Assembly as Shortest Superstring: http://rosalind.info/problems/long/
- Implement BetterBWMatching: http://rosalind.info/problems/ba9m/
- Construct the Burrows-Wheeler Transform of a String: http://rosalind.info/problems/ba9i/
- Implement BWMatching: http://rosalind.info/problems/ba9l/
- Counting Optimal Alignments: http://rosalind.info/problems/ctea/
- Edit Distance Alignment: http://rosalind.info/problems/edta/
- Generate the Last-to-First Mapping of a String: http://rosalind.info/problems/ba9k/
- Maximizing the Gap Symbols of an Optimal Alignment: http://rosalind.info/problems/mgap/
- Mortal Fibonacci Rabbits: http://rosalind.info/problems/fibd/
- Genome Assembly with Perfect Coverage: http://rosalind.info/problems/pcov/
- Constructing a De Bruijn Graph: http://rosalind.info/problems/dbru/
- Error Correction in Reads: http://rosalind.info/problems/corr/
- Find an Eulerian Path in a Graph: http://rosalind.info/problems/ba3g/
- Implement SmallParsimony: http://rosalind.info/problems/ba7f/