tcga-wgs-kraken-microbial-quant.svg

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<!-- 1 -->
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<!-- 1&#45;&gt;0 -->
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<title>1&#45;&gt;0</title>
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<!-- 2 -->
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<!-- 2&#45;&gt;1 -->
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<title>2&#45;&gt;1</title>
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<!-- 3 -->
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<title>3</title>
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<!-- 3&#45;&gt;2 -->
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<title>3&#45;&gt;2</title>
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<!-- 4 -->
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<title>4</title>
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<!-- 4&#45;&gt;3 -->
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<title>4&#45;&gt;3</title>
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<!-- 18 -->
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<title>18</title>
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<title>4&#45;&gt;18</title>
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<!-- 5 -->
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<title>5</title>
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<!-- 5&#45;&gt;4 -->
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<title>5&#45;&gt;4</title>
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<!-- 6 -->
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<title>6</title>
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<!-- 6&#45;&gt;5 -->
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<title>6&#45;&gt;5</title>
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<!-- 7 -->
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<title>7</title>
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<!-- 7&#45;&gt;6 -->
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<title>7&#45;&gt;6</title>
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<!-- 25 -->
<g id="node26" class="node">
<title>25</title>
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<!-- 7&#45;&gt;25 -->
<g id="edge37" class="edge">
<title>7&#45;&gt;25</title>
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<!-- 28 -->
<g id="node29" class="node">
<title>28</title>
<path fill="none" stroke="#d8cb56" stroke-width="2" d="M122,-540C122,-540 12,-540 12,-540 6,-540 0,-534 0,-528 0,-528 0,-516 0,-516 0,-510 6,-504 12,-504 12,-504 122,-504 122,-504 128,-504 134,-510 134,-516 134,-516 134,-528 134,-528 134,-534 128,-540 122,-540"/>
<text text-anchor="middle" x="67" y="-519.5" font-family="sans" font-size="10.00">gdc_rg_unmapped_fastqs</text>
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<!-- 7&#45;&gt;28 -->
<g id="edge41" class="edge">
<title>7&#45;&gt;28</title>
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<!-- 8 -->
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<title>8</title>
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<!-- 8&#45;&gt;5 -->
<g id="edge13" class="edge">
<title>8&#45;&gt;5</title>
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<!-- 24 -->
<g id="node25" class="node">
<title>24</title>
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<!-- 8&#45;&gt;24 -->
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<title>8&#45;&gt;24</title>
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<!-- 9 -->
<g id="node10" class="node">
<title>9</title>
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<!-- 9&#45;&gt;8 -->
<g id="edge16" class="edge">
<title>9&#45;&gt;8</title>
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<!-- 10 -->
<g id="node11" class="node">
<title>10</title>
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<!-- 10&#45;&gt;2 -->
<g id="edge5" class="edge">
<title>10&#45;&gt;2</title>
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<title>10&#45;&gt;4</title>
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<title>10&#45;&gt;18</title>
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<!-- 22 -->
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<title>22</title>
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<!-- 10&#45;&gt;22 -->
<g id="edge32" class="edge">
<title>10&#45;&gt;22</title>
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<!-- 23 -->
<g id="node24" class="node">
<title>23</title>
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<!-- 10&#45;&gt;23 -->
<g id="edge34" class="edge">
<title>10&#45;&gt;23</title>
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<!-- 26 -->
<g id="node27" class="node">
<title>26</title>
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<!-- 10&#45;&gt;26 -->
<g id="edge38" class="edge">
<title>10&#45;&gt;26</title>
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<!-- 11 -->
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<title>11</title>
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<!-- 11&#45;&gt;10 -->
<g id="edge19" class="edge">
<title>11&#45;&gt;10</title>
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<!-- 12 -->
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<title>12</title>
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<!-- 11&#45;&gt;12 -->
<g id="edge22" class="edge">
<title>11&#45;&gt;12</title>
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<!-- 19 -->
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<title>19</title>
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<!-- 11&#45;&gt;19 -->
<g id="edge29" class="edge">
<title>11&#45;&gt;19</title>
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<!-- 12&#45;&gt;10 -->
<g id="edge20" class="edge">
<title>12&#45;&gt;10</title>
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<!-- 13 -->
<g id="node14" class="node">
<title>13</title>
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<text text-anchor="middle" x="691" y="-519.5" font-family="sans" font-size="10.00">kraken2_eupathdb_nucl_library</text>
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<!-- 13&#45;&gt;10 -->
<g id="edge17" class="edge">
<title>13&#45;&gt;10</title>
<path fill="none" stroke="grey" stroke-width="2" d="M729.75,-503.15C749.62,-494 774,-482.77 795.05,-473.08"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="796.3,-476.36 803.92,-469 793.38,-470 796.3,-476.36"/>
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<!-- 14 -->
<g id="node15" class="node">
<title>14</title>
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<text text-anchor="middle" x="691" y="-591.5" font-family="sans" font-size="10.00">eupathdb_nucl_seqid2taxid_map</text>
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<!-- 14&#45;&gt;13 -->
<g id="edge24" class="edge">
<title>14&#45;&gt;13</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="694.5,-553.93 691,-543.93 687.5,-553.93 694.5,-553.93"/>
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<!-- 15 -->
<g id="node16" class="node">
<title>15</title>
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<text text-anchor="middle" x="864" y="-591.5" font-family="sans" font-size="10.00">eupathdb_merged_fasta</text>
</g>
<!-- 15&#45;&gt;13 -->
<g id="edge23" class="edge">
<title>15&#45;&gt;13</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="748.71,-542.58 738.13,-542.07 746.09,-549.06 748.71,-542.58"/>
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<!-- 20 -->
<g id="node21" class="node">
<title>20</title>
<path fill="none" stroke="#56d8d8" stroke-width="2" d="M938.5,-540C938.5,-540 801.5,-540 801.5,-540 795.5,-540 789.5,-534 789.5,-528 789.5,-528 789.5,-516 789.5,-516 789.5,-510 795.5,-504 801.5,-504 801.5,-504 938.5,-504 938.5,-504 944.5,-504 950.5,-510 950.5,-516 950.5,-516 950.5,-528 950.5,-528 950.5,-534 944.5,-540 938.5,-540"/>
<text text-anchor="middle" x="870" y="-519.5" font-family="sans" font-size="10.00">kraken2_eupathdb_prot_library</text>
</g>
<!-- 15&#45;&gt;20 -->
<g id="edge30" class="edge">
<title>15&#45;&gt;20</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="870.84,-554.18 868.21,-543.92 863.87,-553.58 870.84,-554.18"/>
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<!-- 16 -->
<g id="node17" class="node">
<title>16</title>
<path fill="none" stroke="#9fd856" stroke-width="2" d="M898.5,-684C898.5,-684 829.5,-684 829.5,-684 823.5,-684 817.5,-678 817.5,-672 817.5,-672 817.5,-660 817.5,-660 817.5,-654 823.5,-648 829.5,-648 829.5,-648 898.5,-648 898.5,-648 904.5,-648 910.5,-654 910.5,-660 910.5,-660 910.5,-672 910.5,-672 910.5,-678 904.5,-684 898.5,-684"/>
<text text-anchor="middle" x="864" y="-663.5" font-family="sans" font-size="10.00">eupathdb_fastas</text>
</g>
<!-- 16&#45;&gt;15 -->
<g id="edge25" class="edge">
<title>16&#45;&gt;15</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="867.5,-625.93 864,-615.93 860.5,-625.93 867.5,-625.93"/>
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<!-- 17 -->
<g id="node18" class="node">
<title>17</title>
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<text text-anchor="middle" x="864" y="-735.5" font-family="sans" font-size="10.00">eupathdb_fasta_archive</text>
</g>
<!-- 17&#45;&gt;16 -->
<g id="edge26" class="edge">
<title>17&#45;&gt;16</title>
<path fill="none" stroke="grey" stroke-width="2" d="M864,-719.34C864,-712.75 864,-705.08 864,-697.67"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="867.5,-697.93 864,-687.93 860.5,-697.93 867.5,-697.93"/>
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<!-- 18&#45;&gt;3 -->
<g id="edge10" class="edge">
<title>18&#45;&gt;3</title>
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<!-- 19&#45;&gt;10 -->
<g id="edge21" class="edge">
<title>19&#45;&gt;10</title>
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<!-- 20&#45;&gt;10 -->
<g id="edge18" class="edge">
<title>20&#45;&gt;10</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="857.86,-479.8 850.99,-471.73 851.33,-482.32 857.86,-479.8"/>
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<!-- 21 -->
<g id="node22" class="node">
<title>21</title>
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<text text-anchor="middle" x="820" y="-231.5" font-family="sans" font-size="10.00">bracken_db_kmer_distr</text>
</g>
<!-- 21&#45;&gt;2 -->
<g id="edge6" class="edge">
<title>21&#45;&gt;2</title>
<path fill="none" stroke="grey" stroke-width="2" d="M797.29,-215.34C786.92,-207.27 774.45,-197.57 763.07,-188.72"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="765.45,-186.14 755.41,-182.76 761.15,-191.66 765.45,-186.14"/>
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<!-- 22&#45;&gt;21 -->
<g id="edge31" class="edge">
<title>22&#45;&gt;21</title>
<path fill="none" stroke="grey" stroke-width="2" d="M840.63,-359.24C838.17,-341.25 834.12,-312.64 830,-288 828.76,-280.61 827.32,-272.67 825.93,-265.23"/>
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<!-- 23&#45;&gt;3 -->
<g id="edge9" class="edge">
<title>23&#45;&gt;3</title>
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<!-- 23&#45;&gt;26 -->
<g id="edge39" class="edge">
<title>23&#45;&gt;26</title>
<path fill="none" stroke="grey" stroke-width="2" d="M461.26,-359.15C473.36,-350.93 487.94,-341.02 501.13,-332.06"/>
<polygon fill="grey" stroke="grey" stroke-width="2" points="502.98,-335.03 509.29,-326.51 499.05,-329.24 502.98,-335.03"/>
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<!-- 24&#45;&gt;23 -->
<g id="edge33" class="edge">
<title>24&#45;&gt;23</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="434.95,-410.24 432.61,-399.91 428,-409.45 434.95,-410.24"/>
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<!-- 25&#45;&gt;24 -->
<g id="edge36" class="edge">
<title>25&#45;&gt;24</title>
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<polygon fill="grey" stroke="grey" stroke-width="2" points="364.21,-476.46 372.52,-469.88 361.92,-469.85 364.21,-476.46"/>
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<!-- 26&#45;&gt;3 -->
<g id="edge7" class="edge">
<title>26&#45;&gt;3</title>
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<!-- 27 -->
<g id="node28" class="node">
<title>27</title>
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<!-- 27&#45;&gt;1 -->
<g id="edge3" class="edge">
<title>27&#45;&gt;1</title>
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<!-- 28&#45;&gt;27 -->
<g id="edge40" class="edge">
<title>28&#45;&gt;27</title>
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