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Doubts about gff to gtf conversion #67

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z626093820 opened this issue Jun 13, 2023 · 0 comments
Open

Doubts about gff to gtf conversion #67

z626093820 opened this issue Jun 13, 2023 · 0 comments

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@z626093820
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When I use the gff.gff_to_gtf function it reports an error：
image

bellow is my gff

Ib01g1h maker gene 15818 17820 . + . ID=Ib01g1h00010;Name=Ib01g1h00010
Ib01g1h maker exon 15818 16247 . + 0 ID=Ib01g1h00010.1.exon.1;Parent=Ib01g1h00010.1
Ib01g1h maker exon 17604 17773 . + 2 ID=Ib01g1h00010.1.exon.2;Parent=Ib01g1h00010.1
Ib01g1h maker exon 17815 17820 . + 0 ID=Ib01g1h00010.1.exon.3;Parent=Ib01g1h00010.1
Ib01g1h maker CDS 15818 16247 . + 0 ID=Ib01g1h00010.1.CDS.1;Parent=Ib01g1h00010.1
Ib01g1h maker CDS 17604 17773 . + 2 ID=Ib01g1h00010.1.CDS.2;Parent=Ib01g1h00010.1
Ib01g1h maker CDS 17815 17820 . + 0 ID=Ib01g1h00010.1.CDS.3;Parent=Ib01g1h00010.1
Ib01g1h maker mRNA 15818 17820 . + . ID=Ib01g1h00010.1;Name=Ib01g1h00010.1;Parent=Ib01g1h00010
Ib01g1h maker gene 19878 20534 . + . ID=Ib01g1h00020;Name=Ib01g1h00020
Ib01g1h maker exon 19878 20534 . + 0 ID=Ib01g1h00020.1.exon.1;Parent=Ib01g1h00020.1
Ib01g1h maker CDS 19878 20534 . + 0 ID=Ib01g1h00020.1.CDS.1;Parent=Ib01g1h00020.1
Ib01g1h maker mRNA 19878 20534 . + . ID=Ib01g1h00020.1;Name=Ib01g1h00020.1;Parent=Ib01g1h00020
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