For Linux, if want to have the same libraries used for this tutorial installed on your system you can run:
wget https://raw.githubusercontent.com/rcruces/2023_BigBrain_workshop_BigBrains-BrainSpaces/main/environment.yml
conda env create -f environment.yml
For MacOSX,
wget https://raw.githubusercontent.com/rcruces/2023_BigBrain_workshop_BigBrains-BrainSpaces/main/mac_env.yml
conda env create -f mac_env.yml
Then using brew
install git-annex
:
brew install jupyterlab
brew install datalad
pip install RISE