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Use GNRD to get OTT ids #329

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arlin opened this issue Aug 9, 2018 · 0 comments
Open
3 tasks

Use GNRD to get OTT ids #329

arlin opened this issue Aug 9, 2018 · 0 comments
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@arlin
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arlin commented Aug 9, 2018

Name resolution using OT services was a bottleneck during load testing. Possible solution is to use GNRD to resolve against OTT. GNRD can match against OTT, returning ottids, which means we can replace OT taxonomy services with GNRD. This means fewer steps, also probably faster and more robust. GNRD also can include valid names that do not match OTT.

Therefore GNRD can replace OT taxonomy services in all workflows.

  • Dima: please explain how to invoke GNRD to get the desired result. Provide a test case.
  • Abu: please make sure the phylotastic wrapper service supports the above options
  • Van: implement this in the portal.
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