From 70a74f35b3bd71614dfda69af4e17e42ef31ea0a Mon Sep 17 00:00:00 2001
From: Aaron Petkau <aaron.petkau@gmail.com>
Date: Tue, 12 Dec 2023 10:07:05 -0600
Subject: [PATCH] Adding writing of file

---
 .../src/main/nextflow/iridanext/IridaNextObserver.groovy      | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/plugins/nf-iridanext/src/main/nextflow/iridanext/IridaNextObserver.groovy b/plugins/nf-iridanext/src/main/nextflow/iridanext/IridaNextObserver.groovy
index 93a6986..17e9bd8 100644
--- a/plugins/nf-iridanext/src/main/nextflow/iridanext/IridaNextObserver.groovy
+++ b/plugins/nf-iridanext/src/main/nextflow/iridanext/IridaNextObserver.groovy
@@ -200,6 +200,10 @@ class IridaNextObserver implements TraceObserver {
             }
         }
 
+        if (iridaNextOutputPath != null) {
+            iridaNextOutputPath.text = JsonOutput.prettyPrint(iridaNextJSONOutput.toJson())
+            log.info "Setting text for path=${iridaNextOutputPath}"
+        }
         log.info "${JsonOutput.prettyPrint(iridaNextJSONOutput.toJson())}"
     }
 }