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Empty line (of comma's) in a NextSeq sample sheet causes error #122

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JeffreyThiessen opened this issue Dec 2, 2021 · 0 comments
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@JeffreyThiessen
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Describe the bug

If the last line of the sample sheet is a bunch of commas like an empty row generated in excel
,,,,,,,,,
The following error reads
The uploader was unable to find the directory '' in 'Path/to/file/dir', Please verify your SampleSheet Sample_Project matches the directory structure.

This happens because it's looking for a folder with no characters/empty string.

Expected behaviour

It should skip lines that are empty like this.

@JeffreyThiessen JeffreyThiessen added the bug Something isn't working label Dec 2, 2021
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